Core Species

  • Acidaminococcus sp. D21
  • Agathobacter rectalis
  • Akkermansia muciniphila
  • Alistipes putredinis
  • Alistipes shahii
  • Anaerotruncus colihominis
  • Bacteroides cellulosilyticus
  • Bacteroides coprocola
  • Bacteroides coprophilus
  • Bacteroides eggerthii
  • Bacteroides ovatus
  • Bacteroides plebeius
  • Bacteroides sp. 1_1_6
  • Bacteroides sp. 2_1_16
  • Bacteroides uniformis
  • Bacteroides vulgatus
  • Bifidobacterium adolescentis
  • Bifidobacterium longum
  • Blautia hansenii
  • Blautia obeum
  • Butyrivibrio crossotus
  • Catenibacterium mitsuokai
  • Clostridium asparagiforme
  • Clostridium bolteae
  • Clostridium leptum
  • Clostridium sp. L2-50
  • Clostridium sp. M62/1
  • Clostridium sp. SS2/1
  • Collinsella aerofaciens
  • Coprococcus catus
  • Coprococcus comes
  • Coprococcus eutactus
  • Dialister invisus
  • Dorea formicigenerans
  • Dorea longicatena
  • Erysipelotrichaceae
  • Escherichia coli
  • Eubacterium eligens
  • Eubacterium hallii
  • Eubacterium siraeum
  • Eubacterium ventriosum
  • Faecalibacterium prausnitzii
  • Faecalitalea cylindroides
  • Holdemanella biformis
  • Holdemania filiformis
  • Hungatella hathewayi
  • Oscillospira
  • Parabacteroides merdae
  • Parabacteroides sp. D13
  • Prevotella
  • Prevotella copri
  • Prevotella timonensis
  • Roseburia intestinalis
  • Roseburia inulinivorans
  • Ruminococcus bromii
  • Ruminococcus champanellensis
  • Ruminococcus lactaris
  • Ruminococcus sp. 5_1_39BFAA
  • Ruminococcus sp. SR1/5
  • Ruminococcus torques
  • Tyzzerella nexilis

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