Datapunk Opus23 | Capnocytophaga

Capnocytophaga

RANK: Genus

TAXONOMY: Bacteria -> Bacteroidetes/Chlorobi group -> Bacteroidetes -> Flavobacteriia -> Flavobacteriales -> Flavobacteriaceae -> Capnocytophaga

OVERVIEW:

This genus contains microbial species that can reside in the human gastrointestinal tract. [PMC 4262072]

Microbial Abundance Data: Capnocytophaga (Percent of total population with standard deviation [PMID: 22698087])
Group 1				Group 2					Group 3			Group 4
Group 1 Avg	Buccal Mucosa	Keratinized Gingiva	Hard Palate	Group 2 Avg	Throat	Throat	Tonsils	Saliva	Group 3 Avg	Supragingival Plaque	Subgingival Plaque	Stool
0.607 % (1.217)	1.024 % (1.954)	0.428 % (1.155)	0.367 % (0.542)	1.252 % (1.948)	1.068 % (2.448)	1.585 % (2.646)	0.644 % (1.258)	1.712 % (1.440)	8.216 % (5.317)	8.869 % (5.347)	7.562 % (5.287)	0.003 % (0.019)

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Capnocytophaga canimorsus Capnocytophaga cynodegmi Capnocytophaga genosp. AHN8471 Capnocytophaga gingivalis Capnocytophaga granulosa Capnocytophaga haemolytica Capnocytophaga leadbetteri Capnocytophaga ochracea Capnocytophaga sp. Capnocytophaga sp. AHN10044 Capnocytophaga sp. CM59 Capnocytophaga sp. oral taxon 323 Capnocytophaga sp. oral taxon 324 Capnocytophaga sp. oral taxon 326 Capnocytophaga sp. oral taxon 329 Capnocytophaga sp. oral taxon 332 Capnocytophaga sp. oral taxon 334 Capnocytophaga sp. oral taxon 335 Capnocytophaga sp. oral taxon 336 Capnocytophaga sp. oral taxon 338 Capnocytophaga sp. oral taxon 380 Capnocytophaga sp. oral taxon 412 Capnocytophaga sp. oral taxon 863 Capnocytophaga sp. oral taxon 864 Capnocytophaga sp. oral taxon 878 Capnocytophaga sputigena environmental samples	INTERACTIONS	KEGG PATHWAYS 2-Oxocarboxylic acid metabolism ABC transporters Acarbose and validamycin biosynthesis Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Aminobenzoate degradation Arachidonic acid metabolism Arginine and proline metabolism Arginine biosynthesis Bacterial secretion system Base excision repair Biosynthesis of amino acids Biosynthesis of antibiotics Biosynthesis of secondary metabolites Biosynthesis of unsaturated fatty acids Biotin metabolism Butanoate metabolism Carbon metabolism Cationic antimicrobial peptide (CAMP) resistance Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Glutamine and D-glutamate metabolism DNA replication Ether lipid metabolism Fatty acid biosynthesis Fatty acid metabolism Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Homologous recombination Lipoic acid metabolism Lipopolysaccharide biosynthesis Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Monobactam biosynthesis Nicotinate and nicotinamide metabolism Nitrogen metabolism Nitrotoluene degradation Novobiocin biosynthesis Nucleotide excision repair One carbon pool by folate Other glycan degradation Oxidative phosphorylation Pantothenate and CoA biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phenylalanine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Phosphonate and phosphinate metabolism Polyketide sugar unit biosynthesis Porphyrin and chlorophyll metabolism Propanoate metabolism Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism Quorum sensing00253 RNA degradation RNA polymerase Riboflavin metabolism Ribosome Selenocompound metabolism Sphingolipid metabolism Starch and sucrose metabolism Streptomycin biosynthesis Sulfur metabolism Sulfur relay system Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Thiamine metabolism Two-component system Ubiquinone and other terpenoid-quinone biosynthesis Valine, leucine and isoleucine biosynthesis Valine, leucine and isoleucine degradation Vancomycin resistance Vitamin B6 metabolism alpha-Linolenic acid metabolism beta-Alanine metabolism beta-Lactam resistance CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY ENHANCED BY BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE Cephalosproin (bl2e_cfxa) Cephalosporin (bl2b_tem) Penicillin (bl2b_tem)	BIOFILM FORMERS Capnocytophaga ochracea Capnocytophaga sp oral taxon 863	COGEM PATHOGENICITY Capnocytophaga ochracea (2) Capnocytophaga granulosa (2) Capnocytophaga canimorsus (2) Capnocytophaga cynodegmi (2) Capnocytophaga sputigena (2) Capnocytophaga gingivalis (2)

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