Datapunk Opus23 | Micromonospora

Micromonospora

RANK: Genus

TAXONOMY: Bacteria -> Terrabacteria group -> Actinobacteria -> Actinobacteria -> Micromonosporales -> Micromonosporaceae -> Micromonospora

OVERVIEW:

Well-developed, branched, substrate mycelium (0.2–0.6 µm diameter). Nonmotile spores are borne singly, sessile, or terminally on short sporophores. Sporophore development is monopodial or in some cases sympodial. Spores are spherical to oval in shape (0.7–1.5 µm) and in most species have blunt spiny projections. The spores are often carried in branched clusters on short hyphae of the substrate mycelium. Aerial mycelium is usually absent, but some cultures develop sterile short aerial hyphae. Gram-stain-positive, mesophilic, non-acid-fast. Aerobic to microaerophilic. Chemo-organotrophic. Sensitive to pH below 5.0. Growth usually occurs between 20 and 40°C, but not above 50°C. Cell wall contains meso-diaminopimelic acid and/or 3-OH-diaminopimelic acid. Arabinose and xylose are the characteristic sugars present in whole-organism hydrolysates of most species, but variable amounts of galactose, glucose, mannose, and rhamnose can also be found depending on the species. The major phospholipids are phosphatidylethanolamine, phosphatidylinositol, and phosphatidylinositol mannosides. Saturated and unsaturated fatty acids are present, mostly C15:0 iso, C17:0 iso, C15:0 anteiso, C17:0 anteiso, C17:0 10-methyl, and C17:0 10-methyl. Mycolic acids are absent. Major menaquinones are MK-9(H4), MK-9(H6), MK-10(H4), MK-10(H6), or MK-12(H6). Isolated from soil, plant materials, freshwater, and marine environments.

DNA G+C content (mol%): 68–75 (Tm, HPLC).

Type species: Micromonospora chalcea

This genus contains microbial species that can reside in the human gastrointestinal tract. [PMC 4262072]

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Micromonospora aquatica Micromonospora arenae Micromonospora arenincolae Micromonospora aurantiaca Micromonospora auratinigra Micromonospora avicenniae Micromonospora brunnescens Micromonospora carbonacea Micromonospora cellulolyticum Micromonospora chaiyaphumensis Micromonospora chalcea Micromonospora chersina Micromonospora chokoriensis Micromonospora cinerea Micromonospora citrea Micromonospora coerulea Micromonospora coriariae Micromonospora costi Micromonospora coxensis Micromonospora cremea Micromonospora eburnea Micromonospora echinaurantiaca Micromonospora echinofusca Micromonospora echinospora Micromonospora endolithica Micromonospora endophytica Micromonospora equina Micromonospora floridensis Micromonospora fulviviridis Micromonospora fulvopurpurea Micromonospora fulvoviolacea Micromonospora gallica Micromonospora globosa Micromonospora grateloupicola Micromonospora griseorubida Micromonospora haikouensis Micromonospora halophytica Micromonospora halotolerans Micromonospora hermanusense Micromonospora humi Micromonospora inositola Micromonospora inyonensis Micromonospora jinlongensis Micromonospora kangleipakensis Micromonospora krabiensis Micromonospora lacunae Micromonospora lacustris Micromonospora lupini Micromonospora lycii Micromonospora maoerensis Micromonospora marina Micromonospora maritima Micromonospora matsumotoense Micromonospora megalomicea Micromonospora melanospora Micromonospora mirobrigensis Micromonospora narashino Micromonospora narathiwatensis Micromonospora nigra Micromonospora olivasterospora Micromonospora ovatispora Micromonospora pallida Micromonospora parva Micromonospora pattaloongensis Micromonospora peucetia Micromonospora pisi Micromonospora polyrhachis Micromonospora purpureochromogenes Micromonospora rhizosphaerae Micromonospora rifamycinica Micromonospora rosaria Micromonospora rosea Micromonospora ruminantium Micromonospora saelicesensis Micromonospora sagamiensis Micromonospora schwarzwaldensis Micromonospora sediminicola Micromonospora siamensis Micromonospora sonneratiae Micromonospora sp. Micromonospora stanfordense Micromonospora taraxaci Micromonospora terrae Micromonospora tulbaghiae Micromonospora violacea Micromonospora violae Micromonospora viridifaciens Micromonospora wenchangensis Micromonospora yangpuensis Micromonospora yulongensis Micromonospora zamorensis Micromonospora zeae Micromonospora zhanjiangensis Micromonospora zionensis environmental samples	INTERACTIONS	KEGG PATHWAYS 2-Oxocarboxylic acid metabolism ABC transporters Acarbose and validamycin biosynthesis Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Aminobenzoate degradation Arachidonic acid metabolism Arginine and proline metabolism Arginine biosynthesis Ascorbate and aldarate metabolism Bacterial secretion system Base excision repair Benzoate degradation Biosynthesis of amino acids Biosynthesis of ansamycins Biosynthesis of antibiotics Biosynthesis of enediyne antibiotics Biosynthesis of secondary metabolites Biosynthesis of type II polyketide backbone Biosynthesis of type II polyketide products Biosynthesis of unsaturated fatty acids Biosynthesis of vancomycin group antibiotics Biotin metabolism Butanoate metabolism C5-Branched dibasic acid metabolism Caprolactam degradation Carbapenem biosynthesis Carbon metabolism Carotenoid biosynthesis Cationic antimicrobial peptide (CAMP) resistance Chloroalkane and chloroalkene degradation Chlorocyclohexane and chlorobenzene degradation Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Arginine and D-ornithine metabolism D-Glutamine and D-glutamate metabolism DNA replication Degradation of aromatic compounds Dioxin degradation Fatty acid biosynthesis Fatty acid degradation Fatty acid metabolism Fluorobenzoate degradation Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Geraniol degradation Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Histidine metabolism Homologous recombination Inositol phosphate metabolism Limonene and pinene degradation Lipoic acid metabolism Lipopolysaccharide biosynthesis Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Monobactam biosynthesis Naphthalene degradation Nicotinate and nicotinamide metabolism Nitrogen metabolism Non-homologous end-joining Novobiocin biosynthesis Nucleotide excision repair One carbon pool by folate Other glycan degradation Oxidative phosphorylation Pantothenate and CoA biosynthesis Penicillin and cephalosporin biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phenazine biosynthesis Phenylalanine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Phosphonate and phosphinate metabolism Polyketide sugar unit biosynthesis Porphyrin and chlorophyll metabolism Propanoate metabolism Proteasome Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism Quorum sensing00253 RNA degradation RNA polymerase Riboflavin metabolism Ribosome Selenocompound metabolism Sesquiterpenoid and triterpenoid biosynthesis Sphingolipid metabolism Starch and sucrose metabolism Streptomycin biosynthesis Styrene degradation Sulfur metabolism Sulfur relay system Synthesis and degradation of ketone bodies Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Tetracycline biosynthesis Thiamine metabolism Toluene degradation Tryptophan metabolism Two-component system Tyrosine metabolism Ubiquinone and other terpenoid-quinone biosynthesis Valine, leucine and isoleucine biosynthesis Valine, leucine and isoleucine degradation Vancomycin resistance Vitamin B6 metabolism Xylene degradation alpha-Linolenic acid metabolism beta-Alanine metabolism beta-Lactam resistance CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY ENHANCED BY BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE Streptogramin b (ermw) Lincosamide (ermw) Macrolide (ermw) Neomycin (aac3ix)	BIOFILM FORMERS	COGEM PATHOGENICITY Micromonospora lupini (1) Micromonospora aurantiaca (1) Micromonospora sp ATCC 39149 (1) Micromonospora sp CNB394 (1) Micromonospora sp L5 (1)

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