Zymomonas

   RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Alphaproteobacteria -> Sphingomonadales -> Sphingomonadaceae -> Zymomonas

OVERVIEW:

Rod-shaped cells with rounded ends, occasionally ellipsoidal, usually in pairs, 2–6 × 1.0–1.4 µm. Gram negative. Usually non-motile; if motile, they possess one to four polar flagella. Motility may be lost spontaneously. Facultatively anaerobic; some strains are obligately anaerobic. Optimum temperature 25–30°C. Colonies on the standard medium1 are glistening, regularly edged, white to cream colored, 1–2 mm in diameter after 2 d at 30°C. Oxidase negative. Chemoorganotrophic, growing on and fermenting 1 mol of glucose or fructose to almost 2 mol of ethanol, 2 mol of CO2, and some organic acids such as lactic acid. Some strains may also utilize sucrose, but other carbon sources are not used. Gluconate can be degraded but does not serve as sole carbon or energy source (Strohdeicher et al., 1 988). Sorbitol and gluconolactone are formed when grown on sucrose or mixtures of glucose and fructose by a so far unique enzyme, glucose-fructose oxidoreductase. Membranes contain pentacyclic triterpenoids of the hopane series (Sahm et al., 1 993). Gelatinase negative. Nitrates are not reduced and indole is not produced. Zymomonas tolerates 5% ethanol and is acid tolerant, growing at pH 3.5–7.5. Good growth is obtained only when a mixture of amino acids is present in the medium, but no one amino acid is essential. All strains require biotin and pantothenate. Zymomonas occurs as a spoiler in beers, ciders, and perries; as fermenting agents in Agave sap, palm sap, and sugarcane juice; and on honeybees and in ripening honey. The mol% G + C of the DNA is: 47.5–49.5.Type species: Zymomonas mobilis



TAGS
Keystone Core species Type species Pathogen Dysbiosis associated Flora/ commensal Gut associated Probiotic
Leanness Obesity Skin microbiome Fecal distribution Oral microbiome Vaginal microbiome Butyrate producer Catalase producer
Histamine producer Food fermenter Amylolytic Propionate producer Nitrifying
DESCENDANTS
INTERACTIONS
KEGG PATHWAYS
  • 2-Oxocarboxylic acid metabolism
  • ABC transporters
  • Alanine, aspartate and glutamate metabolism
  • Amino sugar and nucleotide sugar metabolism
  • Aminoacyl-tRNA biosynthesis
  • Aminobenzoate degradation
  • Arginine and proline metabolism
  • Arginine biosynthesis
  • Ascorbate and aldarate metabolism
  • Bacterial chemotaxis
  • Bacterial secretion system
  • Base excision repair
  • Biosynthesis of amino acids
  • Biosynthesis of antibiotics
  • Biosynthesis of secondary metabolites
  • Biosynthesis of unsaturated fatty acids
  • Biotin metabolism
  • Butanoate metabolism
  • C5-Branched dibasic acid metabolism
  • Carbapenem biosynthesis
  • Carbon metabolism
  • Carotenoid biosynthesis
  • Cationic antimicrobial peptide (CAMP) resistance
  • Chloroalkane and chloroalkene degradation
  • Chlorocyclohexane and chlorobenzene degradation
  • Citrate cycle (TCA cycle)
  • Cyanoamino acid metabolism
  • Cysteine and methionine metabolism
  • D-Alanine metabolism
  • D-Glutamine and D-glutamate metabolism
  • DNA replication
  • Degradation of aromatic compounds
  • Fatty acid biosynthesis
  • Fatty acid metabolism
  • Flagellar assembly
  • Fluorobenzoate degradation
  • Folate biosynthesis
  • Fructose and mannose metabolism
  • Galactose metabolism
  • Glutathione metabolism
  • Glycerolipid metabolism
  • Glycerophospholipid metabolism
  • Glycine, serine and threonine metabolism
  • Glycolysis / Gluconeogenesis
  • Glyoxylate and dicarboxylate metabolism
  • Histidine metabolism
  • Homologous recombination
  • Inositol phosphate metabolism
  • Lipoic acid metabolism
  • Lipopolysaccharide biosynthesis
  • Lysine biosynthesis
  • Lysine degradation
  • Metabolic pathways
  • Methane metabolism
  • Microbial metabolism in diverse environments
  • Mismatch repair
  • Monobactam biosynthesis
  • Naphthalene degradation
  • Nicotinate and nicotinamide metabolism
  • Nitrogen metabolism
  • Nonribosomal peptide structures
  • Novobiocin biosynthesis
  • Nucleotide excision repair
  • One carbon pool by folate
  • Other glycan degradation
  • Oxidative phosphorylation
  • Pantothenate and CoA biosynthesis
  • Pentose and glucuronate interconversions
  • Pentose phosphate pathway
  • Peptidoglycan biosynthesis
  • Phenylalanine metabolism
  • Phenylalanine, tyrosine and tryptophan biosynthesis
  • Phosphotransferase system (PTS)
  • Porphyrin and chlorophyll metabolism
  • Propanoate metabolism
  • Protein export
  • Purine metabolism
  • Pyrimidine metabolism
  • Pyruvate metabolism
  • Quorum sensing00253
  • RNA degradation
  • RNA polymerase
  • Riboflavin metabolism
  • Ribosome
  • Selenocompound metabolism
  • Sesquiterpenoid and triterpenoid biosynthesis
  • Sphingolipid metabolism
  • Starch and sucrose metabolism
  • Streptomycin biosynthesis
  • Sulfur metabolism
  • Sulfur relay system
  • Terpenoid backbone biosynthesis
  • Thiamine metabolism
  • Toluene degradation
  • Tryptophan metabolism
  • Two-component system
  • Tyrosine metabolism
  • Ubiquinone and other terpenoid-quinone biosynthesis
  • Valine, leucine and isoleucine biosynthesis
  • Valine, leucine and isoleucine degradation
  • Vancomycin resistance
  • Vitamin B6 metabolism
  • beta-Lactam resistance

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