Acidobacteria

   RANK: Phylum

TAXONOMY: cellular organisms -> Bacteria -> Acidobacteria

OVERVIEW:

'Acidobacteria' are a newly devised phylum of Bacteria, whose members are physiologically diverse and ubiquitous, especially in soils, but are under- represented in culture. Members of this phylum are physiologically diverse, some being acidophilic, and were first recognized as a novel division in 1997. The first species, Acidobacterium capsulatum, of this phylum was discovered in 1991. Other notable species are Holophaga foetida, Geothrix fermentans, Acanthopleuribacter pedis and Bryobacter aggregatus. Since they have only recently been discovered and the large majority have not been cultured, the ecology and metabolism of these bacteria is not well understood. However, these bacteria may be an important contributor to ecosystems, since they are particularly abundant within soils. As well as their natural soil habitat, unclassified group II Acidobacteria have also been identified as a contaminant of DNA extraction kit reagents, which may lead to their erroneous appearance in microbiota or metagenomic datasets.



Microbial Abundance Data: Acidobacteria
(Percent of total population with standard deviation [PMID: 22698087])
Group 1
Group 2
Group 3
Group 4
Group 1 Avg
Buccal
Mucosa
Keratinized
Gingiva
Hard
Palate
Group 2 Avg
Throat
Throat
Tonsils
Saliva
Group 3 Avg
Supragingival
Plaque
Subgingival
Plaque
Stool
0.000 %
(0.005)
0.000 %
(0.006)
0.000 %
(0.000)
0.001 %
(0.009)
0.000 %
(0.002)
0.001 %
(0.008)
0.000 %
(0.000)
0.000 %
(0.000)
0.000 %
(0.002)
0.000 %
(0.001)
0.000 %
(0.000)
0.000 %
(0.002)
0.000 %
(0.000)
TAGS
Keystone Core species Type species Pathogen Dysbiosis associated Flora/ commensal Gut associated Probiotic
Leanness Obesity Skin microbiome Fecal distribution Oral microbiome Vaginal microbiome Butyrate producer Catalase producer
Histamine producer Food fermenter Amylolytic Propionate producer Nitrifying
DESCENDANTS
INTERACTIONS
KEGG PATHWAYS

CLUSTERS WITH
METABOLOMICS       
NUTRIENTS/ SUBSTRATES

ENDPRODUCTS

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