Vibrio

   RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Gammaproteobacteria -> Vibrionales -> Vibrionaceae -> Vibrio

OVERVIEW:

Vibrio bacteria are gram-negative and largely halophilic. However, a few species are nonhalophilic, depending on their sodium chloride requirements. Most species are also oxidase-positive. Most species are sensitive to acid pH, but tolerant of alkaline pH. As pathogenic organisms, the CDC estimates that there are 8,000 infections and 60 deaths each year that are the result of Vibrio infections.Vibrio are often pathogens of humans. Several species of Vibrio, including V. cholerae, V. parahaemolyticus, and V. vulnificus, are known to cause seafood-borne illnesses such as septicaemia and wound infections. V. vulnificus is responsible for 95% of seafood-related deaths. While immunosuppressed individuals are most susceptible to Vibrio infections, these bacteria are capable of harming anyone. One of the symptoms of septicaemia is severe secondary lesions in the extremities. However, these cases are gender-specific, found routinely in males over 50. This is because estrogen protexted against the V. vulnificus endotoxin. Another major disease caused by Vibrio species is cholera, which occurs when V. cholerae colonizes the small intestine and releases enterotoxins. Many antibiotic medications are inneffective in treating cholera. Thanks to improved sewage and water treatment, there is a low occurrence of V. cholerae in the United States. Over 90% of the choerla cases occurring in the U.S. are the result of travel to a country where this bacterium is prevalent. Recurring infections of cholera are rare. Attempts at creating a cholera vaccine have had only limited success. Humans are the only natural host of V. cholerae.

This genus contains microbial species that can reside in the human gastrointestinal tract. [PMC 4262072]



TAGS
Keystone Core species Type species Pathogen Dysbiosis associated Flora/ commensal Gut associated Probiotic
Leanness Obesity Skin microbiome Fecal distribution Oral microbiome Vaginal microbiome Butyrate producer Catalase producer
Histamine producer Food fermenter Amylolytic Propionate producer Nitrifying
DESCENDANTS
  • Vibrio aerogenes
  • Vibrio aestivus
  • Vibrio aestuarianus
  • Vibrio agarivorans
  • Vibrio albensis
  • Vibrio alfacsensis
  • Vibrio algoinfesta
  • Vibrio algosus
  • Vibrio anguillarum
  • Vibrio areninigrae
  • Vibrio artabrorum
  • Vibrio aspartigenicus
  • Vibrio astriarenae
  • Vibrio atlanticus
  • Vibrio atypicus
  • Vibrio bivalvicida
  • Vibrio brasiliensis
  • Vibrio breoganii
  • Vibrio caribbeanicus
  • Vibrio casei
  • Vibrio celticus
  • Vibrio cf. shilonii
  • Vibrio cf. splendidus CH-B105
  • Vibrio cf. splendidus CH-B108
  • Vibrio cf. splendidus CH-B125
  • Vibrio chagasii
  • Vibrio cholerae
  • Vibrio cincinnatiensis
  • Vibrio comitans
  • Vibrio coralliilyticus
  • Vibrio cortegadensis
  • Vibrio crassostreae
  • Vibrio crosai
  • Vibrio cyclitrophicus
  • Vibrio diabolicus
  • Vibrio diazotrophicus
  • Vibrio equatorialis
  • Vibrio equitatus
  • Vibrio ezurae
  • Vibrio fluvialis
  • Vibrio fortis
  • Vibrio fortis/pelagia
  • Vibrio furnissii
  • Vibrio galatheae
  • Vibrio gallaecicus
  • Vibrio gallicus
  • Vibrio gazogenes
  • Vibrio gigantis
  • Vibrio halioticoli
  • Vibrio hangzhouensis
  • Vibrio harveyi group
  • Vibrio hemicentroti
  • Vibrio hepatarius
  • Vibrio hippocampi
  • Vibrio hispanicus
  • Vibrio hyugaensis
  • Vibrio ichthyoenteri
  • Vibrio indicus
  • Vibrio inhibens
  • Vibrio inusitatus
  • Vibrio kanaloae
  • Vibrio lentus
  • Vibrio litoralis
  • Vibrio madracius
  • Vibrio mangrovi
  • Vibrio marisflavi
  • Vibrio maritimus
  • Vibrio mediterranei
  • Vibrio metoecus
  • Vibrio metschnikovii
  • Vibrio midae
  • Vibrio mimicus
  • Vibrio navarrensis
  • Vibrio neocaledonicus
  • Vibrio neonatus
  • Vibrio neptunius
  • Vibrio nereis
  • Vibrio nigripulchritudo
  • Vibrio olivaceus
  • Vibrio olivae
  • Vibrio ordalii
  • Vibrio orientalis
  • Vibrio ostreicida
  • Vibrio pacinii
  • Vibrio panuliri
  • Vibrio paracholerae
  • Vibrio pectenicida
  • Vibrio pelagius
  • Vibrio penaeicida
  • Vibrio plantisponsor
  • Vibrio pomeroyi
  • Vibrio pommerensis
  • Vibrio ponsveterensis
  • Vibrio ponticus
  • Vibrio porteresiae
  • Vibrio proteolyticus
  • Vibrio pseudocholerae
  • Vibrio qinhuangdaora
  • Vibrio quintilis
  • Vibrio rarus
  • Vibrio rhizosphaerae
  • Vibrio ruber
  • Vibrio rumoiensis
  • Vibrio salinivivax
  • Vibrio scophthalmi
  • Vibrio shilonii
  • Vibrio sinaloensis
  • Vibrio sp.
  • Vibrio splendidus
  • Vibrio stylophorae
  • Vibrio superstes
  • Vibrio tapetis
  • Vibrio tasmaniensis
  • Vibrio thalassae
  • Vibrio toranzoniae
  • Vibrio tritonius
  • Vibrio tubiashii
  • Vibrio variabilis
  • Vibrio vulnificus
  • Vibrio xiamenensis
  • Vibrio xuii
  • Vibrio zhanjiangensis
  • Vibrio zhuhaiensis
  • environmental samples
  • unclassified Vibrio (miscellaneous)
  • INTERACTIONS
    KEGG PATHWAYS
  • 2-Oxocarboxylic acid metabolism
  • ABC transporters
  • Alanine, aspartate and glutamate metabolism
  • Amino sugar and nucleotide sugar metabolism
  • Aminoacyl-tRNA biosynthesis
  • Arginine and proline metabolism
  • Arginine biosynthesis
  • Ascorbate and aldarate metabolism
  • Bacterial chemotaxis
  • Bacterial secretion system
  • Base excision repair
  • Benzoate degradation
  • Biosynthesis of amino acids
  • Biosynthesis of antibiotics
  • Biosynthesis of secondary metabolites
  • Biosynthesis of siderophore group nonribosomal peptides
  • Biosynthesis of unsaturated fatty acids
  • Biotin metabolism
  • Butanoate metabolism
  • C5-Branched dibasic acid metabolism
  • Caprolactam degradation
  • Carbapenem biosynthesis
  • Carbon metabolism
  • Cationic antimicrobial peptide (CAMP) resistance
  • Chloroalkane and chloroalkene degradation
  • Citrate cycle (TCA cycle)
  • Cyanoamino acid metabolism
  • Cysteine and methionine metabolism
  • D-Alanine metabolism
  • D-Glutamine and D-glutamate metabolism
  • DNA replication
  • Degradation of aromatic compounds
  • Fatty acid biosynthesis
  • Fatty acid degradation
  • Fatty acid metabolism
  • Flagellar assembly
  • Folate biosynthesis
  • Fructose and mannose metabolism
  • Galactose metabolism
  • Geraniol degradation
  • Glutathione metabolism
  • Glycerolipid metabolism
  • Glycerophospholipid metabolism
  • Glycine, serine and threonine metabolism
  • Glycolysis / Gluconeogenesis
  • Glyoxylate and dicarboxylate metabolism
  • Histidine metabolism
  • Homologous recombination
  • Inositol phosphate metabolism
  • Insulin resistance
  • Limonene and pinene degradation
  • Lipoic acid metabolism
  • Lipopolysaccharide biosynthesis
  • Lysine biosynthesis
  • Lysine degradation
  • Metabolic pathways
  • Methane metabolism
  • Microbial metabolism in diverse environments
  • Mismatch repair
  • Monobactam biosynthesis
  • Naphthalene degradation
  • Nicotinate and nicotinamide metabolism
  • Nitrogen metabolism
  • Nitrotoluene degradation
  • Novobiocin biosynthesis
  • Nucleotide excision repair
  • One carbon pool by folate
  • Other glycan degradation
  • Oxidative phosphorylation
  • Pantothenate and CoA biosynthesis
  • Pentose and glucuronate interconversions
  • Pentose phosphate pathway
  • Peptidoglycan biosynthesis
  • Phenylalanine metabolism
  • Phenylalanine, tyrosine and tryptophan biosynthesis
  • Phosphonate and phosphinate metabolism
  • Phosphotransferase system (PTS)
  • Porphyrin and chlorophyll metabolism
  • Propanoate metabolism
  • Protein export
  • Purine metabolism
  • Pyrimidine metabolism
  • Pyruvate metabolism
  • RNA degradation
  • RNA polymerase
  • Riboflavin metabolism
  • Ribosome
  • Secondary bile acid biosynthesis
  • Selenocompound metabolism
  • Starch and sucrose metabolism
  • Streptomycin biosynthesis
  • Styrene degradation
  • Sulfur metabolism
  • Sulfur relay system
  • Taurine and hypotaurine metabolism
  • Terpenoid backbone biosynthesis
  • Thiamine metabolism
  • Tryptophan metabolism
  • Two-component system
  • Tyrosine metabolism
  • Ubiquinone and other terpenoid-quinone biosynthesis
  • Valine, leucine and isoleucine biosynthesis
  • Valine, leucine and isoleucine degradation
  • Vancomycin resistance
  • Vibrio cholerae infection
  • Vibrio cholerae pathogenic cycle
  • Vitamin B6 metabolism
  • alpha-Linolenic acid metabolism
  • beta-Alanine metabolism
  • beta-Lactam resistance

  • CLUSTERS WITH
    METABOLOMICS       
    NUTRIENTS/ SUBSTRATES
  • L-Tryptophan

  • ENDPRODUCTS
  • Indole

  • INHIBITED BY
  • Camellia sinensis
  • Hyocyamine

  • ENHANCED BY

    BIOTRANSFORMS

    BIOTRANFORM
    ANTIBIOTIC RESISTANCE   
  • Tetracycline (tetm)
  • Sulfonamide (sul2)
  • Tetracycline (tetd)
  • Sulfonamide (sul1)
  • Tigecycline (norm)
  • Streptomycin (norm)
  • Kanamycin (norm)
  • Ciprofloxacin (norm)
  • Norfloxacin (norm)
  • Trimethoprim (dfra1)
  • Chloramphenicol (catb5)
  • Chloramphenicol (cml_e3)
  • Tetracycline (teta)
  • Tetracycline (tetb)
  • Fluoroquinolone (qnrs)
  • Trimethoprim (dfra5)
  • Erythromycin (erea)
  • Spectinomycin (ant3ia)
  • Streptomycin (ant3ia)
  • Trimethoprim (dfra12)
  • Monobactam (bl2be_ctxm)
  • Cephalosporin ii (bl2be_ctxm)
  • Cephalosporin iii (bl2be_ctxm)
  • Penicillin (bl2be_ctxm)
  • Cephalosporin i (bl2be_ctxm)
  • Ceftazidime (bl2be_ctxm)
  • Tetracycline (tet34)
  • Tobramycin (aac6ib)
  • Netilmicin (aac6ib)
  • Isepamicin (aac6ib)
  • Amikacin (aac6ib)
  • Sisomicin (aac6ib)
  • Dibekacin (aac6ib)
  • Trimethoprim (dfra14)
  • Tobramycin (ant2ia)
  • Sisomicin (ant2ia)
  • Kanamycin (ant2ia)
  • Gentamicin (ant2ia)
  • Dibekacin (ant2ia)
  • Cephalosporin (bl2b_tem)
  • Penicillin (bl2b_tem)
  • Carbenicillin (bl2c_pse1)
  • Penicillin (bl2c_pse1)
  • Streptomycin (aph6id)
  • Chloramphenicol (cata14)
  • Cloxacillin (bl2d_oxa2)
  • Penicillin (bl2d_oxa2)
  • Trimethoprim (dfra15)
  • Streptomycin (aph33ib)
  • Tetracycline (tete)
  • Chloramphenicol (cata2)
  • BIOFILM FORMERS   COGEM PATHOGENICITY   

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