Datapunk Opus23 | Hyphomonas

Hyphomonas

RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Alphaproteobacteria -> Rhodobacterales -> Hyphomonadaceae -> Hyphomonas

OVERVIEW:

Rod-shaped to oval mature cells measure 0.5–1.0 × 1.0–3.0 µm and may become larger and rounder just prior to bud formation. Unicellular. Cell division occurs by budding. Buds are produced at tips of single polar prosthecae, which are 0.2–0.3 µm in diameter and 1–5 times the length of the cell body. Prosthecae are nonseptate and rarely branch under normal growth conditions. Pleomorphic. Hyphomonas spp. have a biphasic life cycle and normally generate only a single polar prostheca (hypha). Young daughter cells (i.e., newly formed buds) are oval to pear shaped, lack prosthecae, and are smaller than the mother cell. Motile by means of a single polar to lateral flagellum located on developing buds or young daughter cells. Gram negative. Not acid-fast. Aerobic. Nonsporeforming. Chemooganotrophic. Hyphomonas spp. catabolize amino acids or tricarboxylic acid cycle intermediates for energy and growth. All strains investigated thus far are catalase positive, oxidase positive, nonproteolytic, nonsaccharolytic, and nonpathogenic. Gelatin and starch not hydrolyzed; no indole from tryptophan; no DNase, ornithine decarboxylase, lysine decarboxylase, or coagulase activity. With one exception, all species denitrify. Amino acids are required for heterotrophic growth. Optimal temperature for growth ranges from 22 to 37°C at one atmosphere of pressure. Prefer slightly alkaline conditions for growth. All strains were isolated from marine sources.The mol% G + C of the DNA is: 57–64.Type species: Hyphomonas polymorpha

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Hyphomonas adhaerens Hyphomonas atlantica Hyphomonas beringensis Hyphomonas chukchiensis Hyphomonas hirschiana Hyphomonas jannaschiana Hyphomonas johnsonii Hyphomonas neptunium Hyphomonas oceanitis Hyphomonas polymorpha Hyphomonas rosenbergii Hyphomonas sp. Hyphomonas taiwanensis environmental samples	INTERACTIONS	KEGG PATHWAYS 2-Oxocarboxylic acid metabolism ABC transporters Acarbose and validamycin biosynthesis Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Aminobenzoate degradation Arachidonic acid metabolism Arginine and proline metabolism Arginine biosynthesis Ascorbate and aldarate metabolism Bacterial chemotaxis Bacterial secretion system Base excision repair Benzoate degradation Biosynthesis of amino acids Biosynthesis of antibiotics Biosynthesis of secondary metabolites Biosynthesis of unsaturated fatty acids Biotin metabolism Butanoate metabolism C5-Branched dibasic acid metabolism Caprolactam degradation Carbapenem biosynthesis Carbon metabolism Cationic antimicrobial peptide (CAMP) resistance Chloroalkane and chloroalkene degradation Chlorocyclohexane and chlorobenzene degradation Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Arginine and D-ornithine metabolism D-Glutamine and D-glutamate metabolism DNA replication Degradation of aromatic compounds Fatty acid biosynthesis Fatty acid degradation Fatty acid metabolism Flagellar assembly Fluorobenzoate degradation Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Geraniol degradation Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Histidine metabolism Homologous recombination Inositol phosphate metabolism Limonene and pinene degradation Lipoic acid metabolism Lipopolysaccharide biosynthesis Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Monobactam biosynthesis Naphthalene degradation Nicotinate and nicotinamide metabolism Nitrogen metabolism Novobiocin biosynthesis Nucleotide excision repair One carbon pool by folate Oxidative phosphorylation Pantothenate and CoA biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phenylalanine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Phosphonate and phosphinate metabolism Phosphotransferase system (PTS) Polycyclic aromatic hydrocarbon degradation Polyketide sugar unit biosynthesis Porphyrin and chlorophyll metabolism Propanoate metabolism Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism Quorum sensing00253 RNA degradation RNA polymerase Riboflavin metabolism Ribosome Secondary bile acid biosynthesis Selenocompound metabolism Starch and sucrose metabolism Streptomycin biosynthesis Styrene degradation Sulfur metabolism Sulfur relay system Synthesis and degradation of ketone bodies Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Thiamine metabolism Toluene degradation Tryptophan metabolism Two-component system Tyrosine metabolism Ubiquinone and other terpenoid-quinone biosynthesis Valine, leucine and isoleucine biosynthesis Valine, leucine and isoleucine degradation Vancomycin resistance Vitamin B6 metabolism Xylene degradation beta-Alanine metabolism beta-Lactam resistance CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY ENHANCED BY BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE	BIOFILM FORMERS	COGEM PATHOGENICITY Hyphomonas neptunium (1)

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