Datapunk Opus23 | Bdellovibrio

Bdellovibrio

RANK: Genus

TAXONOMY: Bacteria -> Proteobacteria -> delta/epsilon subdivisions -> Deltaproteobacteria -> Bdellovibrionales -> Bdellovibrionaceae -> Bdellovibrio

OVERVIEW:

Vibrios, 0.20–0.4 × 0.5–1.4 μm. Motile by a single, polar, sheathed flagellum. Gram negative. Prey upon Gram-negative bacteria. Have a predatory lifestyle characterized by two distinct phases, a free-living attack phase and an intraperiplasmic growth phase (Figure 1). Prey-independent mutants that have lost their requirement for prey cells occur spontaneously and can be isolated in the laboratory. Some of these prey-independent mutants retain the ability to grow predaciously and are considered to be facultative with respect to their requirement for prey cells. Aerobic, having a strictly respiratory type of metabolism with oxygen as the terminal electron acceptor. Contain cytochromes a, c, and b. Mesophilic. Oxidase positive. Catalase variable. Occur in fresh and salt water, soil, and sewage.The mol% G + C of the DNA is: 49.5–51 (Torrella et al., 1978).Type species: Bdellovibrio bacteriovorus

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Bdellovibrio bacteriovorus Bdellovibrio exovorus Bdellovibrio sp. Bdellovibrio sp. oral taxon 039 environmental samples	INTERACTIONS	KEGG PATHWAYS 2-Oxocarboxylic acid metabolism ABC transporters Acarbose and validamycin biosynthesis Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Arachidonic acid metabolism Arginine and proline metabolism Arginine biosynthesis Bacterial chemotaxis Bacterial secretion system Base excision repair Benzoate degradation Biosynthesis of amino acids Biosynthesis of antibiotics Biosynthesis of secondary metabolites Biosynthesis of unsaturated fatty acids Biotin metabolism Butanoate metabolism Caprolactam degradation Carbon metabolism Carotenoid biosynthesis Cationic antimicrobial peptide (CAMP) resistance Chloroalkane and chloroalkene degradation Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Glutamine and D-glutamate metabolism DNA replication Degradation of aromatic compounds Fatty acid biosynthesis Fatty acid degradation Fatty acid metabolism Flagellar assembly Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Geraniol degradation Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Histidine metabolism Homologous recombination Inositol phosphate metabolism Limonene and pinene degradation Lipoic acid metabolism Lipopolysaccharide biosynthesis Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Monobactam biosynthesis Naphthalene degradation Nicotinate and nicotinamide metabolism Nitrogen metabolism Non-homologous end-joining Novobiocin biosynthesis Nucleotide excision repair One carbon pool by folate Oxidative phosphorylation Pantothenate and CoA biosynthesis Penicillin and cephalosporin biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phenylalanine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Polyketide sugar unit biosynthesis Porphyrin and chlorophyll metabolism Propanoate metabolism Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism Quorum sensing00253 RNA degradation RNA polymerase Riboflavin metabolism Ribosome Secondary bile acid biosynthesis Selenocompound metabolism Starch and sucrose metabolism Streptomycin biosynthesis Styrene degradation Sulfur metabolism Sulfur relay system Synthesis and degradation of ketone bodies Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Thiamine metabolism Tryptophan metabolism Two-component system Tyrosine metabolism Ubiquinone and other terpenoid-quinone biosynthesis Valine, leucine and isoleucine biosynthesis Valine, leucine and isoleucine degradation Vancomycin resistance Vitamin B6 metabolism alpha-Linolenic acid metabolism beta-Alanine metabolism beta-Lactam resistance CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY ENHANCED BY BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE	BIOFILM FORMERS Bdellovibrio bacteriovorus	COGEM PATHOGENICITY Bdellovibrio bacteriovorus (1) Bdellovibrio exovorus (1)

OPUS 23™ IS A REGISTERED TRADEMARK ® OF DATAPUNK BIOINFORMATICS, LLC. COPYRIGHT © 2015-2023. ALL RIGHTS RESERVED. |