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Proteobacteria

RANK: Phylum

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria

OVERVIEW:

The 'Proteobacteria' are a major group (phylum) of gram-negative bacteria. They include a wide variety of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, and Yersinia, and many other notable genera. Others are free-living (nonparasitic), and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the 'purple bacteria and their relatives'. Because of the great diversity of forms found in this group, the Proteobacteria are named after Proteus, a Greek god of the sea capable of assuming many different shapes; it is not named after the genus Proteus (bacterium) Proteus. Alphaproteobacteria grow at very low levels of nutrients and have unusual morphology such as stalks and buds. They include agriculturally important bacteria capable of inducing nitrogen fixation in symbiosis with plants. An example of alphaproteobacteria is Wolbachia which is the most common infectious bacterial genus in the world that lives only inside the cells of their hosts, usually insects. Betaproteobacteria often use nutrient substances that diffuse away from areas of anaerobic decomposition of organic matter (hydrogen gas, ammonia, methane) and includes chemoautotrophs. An example of betaproteobacteria is Bordetella pertussis which causes pertussis, or whooping cough. Gammaproteobacteria are the largest subgroup which include Acinetobacter, Pseudomonas, Escherichia coli, Salmonella, and Serratia marcescens. Deltaproteobacteria include bacteria that are predators on other bacteria and are important contributors to the sulfur cycle. An example is Desulfovibrio which is found in anaerobic sediments and in the intestinal tracts of humans and animals. Epsilonproteobacteria are slender gram-negative rods that are helical or curved. They are also motile by flagella and are microaerophilic. An example is Helicobacter which has been identified as the most common cause of peptic ulcers in humans and a cause of stomach cancer. Antibiotic exposure was associated with an increase in fecal Proteobacteria and a decrease in Actinobacteria and particularly Bifidobacterium species at four weeks of age as compared to non-exposed neonates. PMID: 25444008



Microbial Abundance Data: Proteobacteria
(Percent of total population with standard deviation [PMID: 22698087])
Group 1
Group 2
Group 3
Group 4
Group 1 Avg
Buccal
Mucosa
Keratinized
Gingiva
Hard
Palate
Group 2 Avg
Throat
Throat
Tonsils
Saliva
Group 3 Avg
Supragingival
Plaque
Subgingival
Plaque
Stool
17.425 %
(9.842)
15.618 %
(8.770)
21.665 %
(11.943)
14.992 %
(8.815)
17.243 %
(11.885)
14.497 %
(12.285)
14.191 %
(10.281)
19.688 %
(13.580)
20.595 %
(11.394)
17.386 %
(10.408)
19.602 %
(10.851)
15.170 %
(9.966)
2.910 %
(4.735)
TAGS
Keystone
Core species
Type species
Pathogen
Dysbiosis associated
Flora/ commensal
Gut associated
Probiotic
Leanness
Obesity
Skin microbiome
Fecal distribution
Oral microbiome
Vaginal microbiome
Butyrate producer
Catalase producer
Histamine producer
Food fermenter
Amylolytic
Propionate producer
Nitrifying
DESCENDANTS
INTERACTIONS
KEGG PATHWAYS

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