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Sphingomonas

RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Alphaproteobacteria -> Sphingomonadales -> Sphingomonadaceae -> Sphingomonas

OVERVIEW:



This genus contains microbial species that can reside in the human gastrointestinal tract. [PMC 4262072]



Microbial Abundance Data: Sphingomonas
(Percent of total population with standard deviation [PMID: 22698087])
Group 1
Group 2
Group 3
Group 4
Group 1 Avg
Buccal
Mucosa
Keratinized
Gingiva
Hard
Palate
Group 2 Avg
Throat
Throat
Tonsils
Saliva
Group 3 Avg
Supragingival
Plaque
Subgingival
Plaque
Stool
0.005 %
(0.023)
0.004 %
(0.027)
0.002 %
(0.010)
0.008 %
(0.032)
0.010 %
(0.065)
0.012 %
(0.039)
0.002 %
(0.009)
0.000 %
(0.002)
0.027 %
(0.211)
0.001 %
(0.006)
0.001 %
(0.004)
0.002 %
(0.008)
0.004 %
(0.041)
TAGS
Keystone
Core species
Type species
Pathogen
Dysbiosis associated
Flora/ commensal
Gut associated
Probiotic
Leanness
Obesity
Skin microbiome
Fecal distribution
Oral microbiome
Vaginal microbiome
Butyrate producer
Catalase producer
Histamine producer
Food fermenter
Amylolytic
Propionate producer
Nitrifying
Biofilm producer
DESCENDANTS
  • 'Rhizomonas' sp.
  • 'Sphingomonas ginsengisoli' Hoang et al. 2012
  • Sphingomonas abaci
  • Sphingomonas adhaesiva
  • Sphingomonas aerolata
  • Sphingomonas aerophila
  • Sphingomonas aestuarii
  • Sphingomonas alpina
  • Sphingomonas anadarae
  • Sphingomonas aquaticus
  • Sphingomonas aquatilis
  • Sphingomonas asaccharolytica
  • Sphingomonas astaxanthinifaciens
  • Sphingomonas aurantiaca
  • Sphingomonas azotifigens
  • Sphingomonas azotofornans
  • Sphingomonas bosoensis
  • Sphingomonas canadensis
  • Sphingomonas changbaiensis
  • Sphingomonas cynarae
  • Sphingomonas daechungensis
  • Sphingomonas desiccabilis
  • Sphingomonas dokdonensis
  • Sphingomonas echinoides
  • Sphingomonas elodea
  • Sphingomonas endophytica
  • Sphingomonas faeni
  • Sphingomonas fennica
  • Sphingomonas formosensis
  • Sphingomonas gei
  • Sphingomonas gimensis
  • Sphingomonas ginsengisoli An et al. 2013
  • Sphingomonas ginsenosidimutans
  • Sphingomonas ginsenosidivorax
  • Sphingomonas glacialis
  • Sphingomonas guangdongensis
  • Sphingomonas haloaromaticamans
  • Sphingomonas hankookensis
  • Sphingomonas hankyongensis
  • Sphingomonas hengshuiensis
  • Sphingomonas histidinilytica
  • Sphingomonas humi
  • Sphingomonas hunanensis
  • Sphingomonas hylomeconis
  • Sphingomonas indica
  • Sphingomonas insulae
  • Sphingomonas japonica
  • Sphingomonas jaspsi
  • Sphingomonas jejuensis
  • Sphingomonas jinjuensis
  • Sphingomonas kaistensis
  • Sphingomonas koreensis
  • Sphingomonas kwangyangensis
  • Sphingomonas kyeonggiensis
  • Sphingomonas kyungheensis
  • Sphingomonas laterariae
  • Sphingomonas leidyi
  • Sphingomonas mali
  • Sphingomonas mathurensis
  • Sphingomonas melonis
  • Sphingomonas metalli
  • Sphingomonas molluscorum
  • Sphingomonas morindae
  • Sphingomonas mucosissima
  • Sphingomonas naasensis
  • Sphingomonas oligoaromativorans
  • Sphingomonas oligophenolica
  • Sphingomonas oryziterrae
  • Sphingomonas panacis
  • Sphingomonas panni
  • Sphingomonas parapaucimobilis
  • Sphingomonas parvus
  • Sphingomonas paucimobilis
  • Sphingomonas phyllosphaerae
  • Sphingomonas pituitosa
  • Sphingomonas polyaromaticivorans
  • Sphingomonas pruni
  • Sphingomonas pseudosanguinis
  • Sphingomonas rhizogenes
  • Sphingomonas rosea
  • Sphingomonas roseiflava
  • Sphingomonas rubra
  • Sphingomonas sanguinis
  • Sphingomonas sanxanigenens
  • Sphingomonas sediminicola
  • Sphingomonas soli
  • Sphingomonas sp.
  • Sphingomonas sp. 24T
  • Sphingomonas sp. 540
  • Sphingomonas sp. CCGE4098
  • Sphingomonas sp. DS-3PS-11
  • Sphingomonas sp. HJ-JR3
  • Sphingomonas sp. MM62(2011)
  • Sphingomonas sp. MN 18.3a
  • Sphingomonas sp. PDD-26b-16
  • Sphingomonas sp. Zn3
  • Sphingomonas sp. oral taxon 003
  • Sphingomonas sp. oral taxon 004
  • Sphingomonas sp. oral taxon 006
  • Sphingomonas sp. oral taxon 007
  • Sphingomonas sp.TP11-2
  • Sphingomonas starnbergensis
  • Sphingomonas swuensis
  • Sphingomonas taxi
  • Sphingomonas trueperi
  • Sphingomonas ursincola
  • Sphingomonas wittichii
  • Sphingomonas xinjiangensis
  • Sphingomonas yabuuchiae
  • Sphingomonas yantingensis
  • Sphingomonas yunnanensis
  • environmental samples
  • unclassified Sphingomonas
  • INTERACTIONS
    KEGG PATHWAYS
  • 2-Oxocarboxylic acid metabolism
  • ABC transporters
  • Acarbose and validamycin biosynthesis
  • Alanine, aspartate and glutamate metabolism
  • Amino sugar and nucleotide sugar metabolism
  • Aminoacyl-tRNA biosynthesis
  • Aminobenzoate degradation
  • Arachidonic acid metabolism
  • Arginine and proline metabolism
  • Arginine biosynthesis
  • Ascorbate and aldarate metabolism
  • Bacterial chemotaxis
  • Bacterial secretion system
  • Base excision repair
  • Benzoate degradation
  • Biosynthesis of amino acids
  • Biosynthesis of antibiotics
  • Biosynthesis of secondary metabolites
  • Biosynthesis of unsaturated fatty acids
  • Biotin metabolism
  • Butanoate metabolism
  • C5-Branched dibasic acid metabolism
  • Carbapenem biosynthesis
  • Carbon metabolism
  • Carotenoid biosynthesis
  • Cationic antimicrobial peptide (CAMP) resistance
  • Chloroalkane and chloroalkene degradation
  • Chlorocyclohexane and chlorobenzene degradation
  • Citrate cycle (TCA cycle)
  • Cyanoamino acid metabolism
  • Cysteine and methionine metabolism
  • D-Alanine metabolism
  • D-Glutamine and D-glutamate metabolism
  • DNA replication
  • Degradation of aromatic compounds
  • Dioxin degradation
  • Fatty acid biosynthesis
  • Fatty acid degradation
  • Fatty acid metabolism
  • Flagellar assembly
  • Fluorobenzoate degradation
  • Folate biosynthesis
  • Fructose and mannose metabolism
  • Furfural degradation
  • Galactose metabolism
  • Geraniol degradation
  • Glutathione metabolism
  • Glycerolipid metabolism
  • Glycerophospholipid metabolism
  • Glycine, serine and threonine metabolism
  • Glycolysis / Gluconeogenesis
  • Glyoxylate and dicarboxylate metabolism
  • Histidine metabolism
  • Homologous recombination
  • Inositol phosphate metabolism
  • Limonene and pinene degradation
  • Lipoic acid metabolism
  • Lipopolysaccharide biosynthesis
  • Lysine biosynthesis
  • Lysine degradation
  • Metabolic pathways
  • Methane metabolism
  • Microbial metabolism in diverse environments
  • Mismatch repair
  • Monobactam biosynthesis
  • Naphthalene degradation
  • Nicotinate and nicotinamide metabolism
  • Nitrogen metabolism
  • Nitrotoluene degradation
  • Non-homologous end-joining
  • Novobiocin biosynthesis
  • Nucleotide excision repair
  • One carbon pool by folate
  • Oxidative phosphorylation
  • Pantothenate and CoA biosynthesis
  • Penicillin and cephalosporin biosynthesis
  • Pentose and glucuronate interconversions
  • Pentose phosphate pathway
  • Peptidoglycan biosynthesis
  • Phenazine biosynthesis
  • Phenylalanine metabolism
  • Phenylalanine, tyrosine and tryptophan biosynthesis
  • Phosphonate and phosphinate metabolism
  • Phosphotransferase system (PTS)
  • Polyketide sugar unit biosynthesis
  • Porphyrin and chlorophyll metabolism
  • Propanoate metabolism
  • Protein export
  • Purine metabolism
  • Pyrimidine metabolism
  • Pyruvate metabolism
  • Quorum sensing00253
  • RNA degradation
  • RNA polymerase
  • Riboflavin metabolism
  • Ribosome
  • Secondary bile acid biosynthesis
  • Selenocompound metabolism
  • Starch and sucrose metabolism
  • Steroid degradation
  • Streptomycin biosynthesis
  • Styrene degradation
  • Sulfur metabolism
  • Sulfur relay system
  • Synthesis and degradation of ketone bodies
  • Taurine and hypotaurine metabolism
  • Terpenoid backbone biosynthesis
  • Thiamine metabolism
  • Toluene degradation
  • Tryptophan metabolism
  • Two-component system
  • Tyrosine metabolism
  • Ubiquinone and other terpenoid-quinone biosynthesis
  • Valine, leucine and isoleucine biosynthesis
  • Valine, leucine and isoleucine degradation
  • Vancomycin resistance
  • Vitamin B6 metabolism
  • Xylene degradation
  • alpha-Linolenic acid metabolism
  • beta-Alanine metabolism
  • beta-Lactam resistance

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