Shigella flexneri

RANK: Species

TAXONOMY: Bacteria -> Proteobacteria -> Gammaproteobacteria -> Enterobacteriales -> Enterobacteriaceae -> Shigella -> Shigella flexneri

OVERVIEW:

This species has been identified as a resident in the human gastrointestinal tract based on the phylogenetic framework of its small subunit ribosomal RNA gene sequences.[PMC 4262072]

2

COGEM

COGEM released a comprehensive database of pathogenicity assessment of around 2575 bacterial species in 2011. The database ranks the pathogenicity of species on a scale of 1 to 4. Shigella flexneri ranks 2 on this scale: Species that can cause diseases in humans or animals, which are unlikely to spread in the human population and for which an adequate prophylaxis or therapy exists

TAGS >

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying	Biofilm producer

INTERACTIONS	KEGG PATHWAYS CLUSTERS WITH Group 1 Mesorhizobium loti Acidovorax avenae Cupriavidus necator Burkholderia cepacia Shigella flexneri Rhizobium etli Brucella melitensis Xanthomonas campestris Rhizobium leguminosarum Agrobacterium tumefaciens Erwinia carotovora Ralstonia solanacearum Caulobacter crescentus Bartonella tribocorum Xylella fastidiosa Sinorhizobium meliloti Burkholderia pseudomallei Gloeobacter violaceus Ochrobactrum anthropi Clavibacter michiganensis Pseudomonas syringae Xanthomonas oryzae Bradyrhizobium japonicum Acinetobacter Burkholderia Bartonella bacilliformis Burkholderia cenocepacia Cupriavidus metallidurans Vibrio fischeri Xanthomonas axonopodis Brucella suis Chromobacterium violaceum Group 71 Shigella dysenteriae Photobacterium profundum Vibrio cholerae Shigella flexneri Chromohalobacter salexigens Group 36 Salmonella enterica Aeromonas hydrophila Vibrio vulnificus Campylobacter jejuni Vibrio parahaemolyticus Vibrio cholerae Shigella flexneri Group 23 Yersinia pseudotuberculosis Listeria welshimeri Lactobacillus salivarius Yersinia pestis Lactobacillus johnsonii Listeria monocytogenes Salmonella enterica Aeromonas hydrophila Lawsonia intracellularis Shigella flexneri Corynebacterium jeikeium Listeria innocua Lactobacillus sakei Group 41 Yersinia pseudotuberculosis Shigella sonnei Shigella dysenteriae Shigella flexneri Shigella boydii	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY Vitamin D [parent] Plantain bananas [parent] Curcuma longa [parent] Camellia sinensis [parent] Astragalus [parent] ENHANCED BY Navy bean (Cooked) [parent] BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE See Parent Genus (Shigella)	BIOFILM FORMERS See Parent Genus (Shigella)	COGEM PATHOGENICITY See Parent Genus (Shigella)