Datapunk Opus23 | Lactobacillus sakei

Lactobacillus sakei

RANK: Species

TAXONOMY: Terrabacteria group -> Firmicutes -> Bacilli -> Lactobacillales -> Lactobacillaceae -> Lactobacillus -> Lactobacillus sakei

OVERVIEW:

The fecal concentration of Lactobacillus reuteri was positively correlated with BMI (coefficient=0.85; 95% confidence interval (CI) 0.12-0.58; P=0.02) in agreement with what was reported for Lactobacillus sakei. [PMID: 23459324]

This species has been identified as a resident in the human gastrointestinal tract based on the phylogenetic framework of its small subunit ribosomal RNA gene sequences.[PMC 4262072]

COGEM

COGEM released a comprehensive database of pathogenicity assessment of around 2575 bacterial species in 2011. The database ranks the pathogenicity of species on a scale of 1 to 4. Lactobacillus sakei ranks on this scale:

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying	Biofilm producer

INTERACTIONS INHIBITS Clostridioides difficile Enterococcus	KEGG PATHWAYS CLUSTERS WITH Group 156 Streptococcus thermophilus Lactobacillus sakei Group 7 Staphylococcus epidermidis Leuconostoc mesenteroides Lactobacillus acidophilus Lactobacillus plantarum Bacillus cereus Streptococcus thermophilus Listeria monocytogenes Pediococcus pentosaceus Bacteroides fragilis Staphylococcus saprophyticus Clostridium perfringens Listeria innocua Corynebacterium jeikeium Lactobacillus sakei Streptococcus pneumoniae Staphylococcus aureus Streptococcus sanguinis Streptococcus pyogenes Lactobacillus casei Pseudomonas aeruginosa Lactobacillus brevis Enterococcus faecalis Streptococcus agalactiae Fusobacterium nucleatum Lactococcus lactis Streptococcus gordonii Staphylococcus haemolyticus Group 68 Staphylococcus saprophyticus Oenococcus oeni Lactobacillus sakei Lactobacillus brevis Group 2 Leuconostoc mesenteroides Lactobacillus salivarius Lactobacillus acidophilus Bifidobacterium adolescentis Lactobacillus plantarum Streptococcus thermophilus Oenococcus oeni Listeria monocytogenes Lactobacillus gasseri Chloroflexus aurantiacus Bacillus pumilus Pediococcus pentosaceus Bacillus licheniformis Listeria innocua Lactobacillus sakei Clostridium acetobutylicum Bifidobacterium longum Lactobacillus johnsonii Lactobacillus brevis Lactococcus lactis Streptococcus gordonii Lactobacillus delbrueckii Group 15 Streptococcus mutans Leuconostoc mesenteroides Lactobacillus salivarius Lactobacillus johnsonii Streptococcus thermophilus Oenococcus oeni Listeria monocytogenes Lactobacillus brevis Hahella chejuensis Pediococcus pentosaceus Listeria innocua Lactobacillus delbrueckii Lactobacillus sakei Group 4 Streptococcus mutans Leuconostoc mesenteroides Lactobacillus salivarius Lactobacillus acidophilus Bifidobacterium adolescentis Streptococcus thermophilus Lactobacillus gasseri Pediococcus pentosaceus Clostridium perfringens Listeria innocua Lactobacillus sakei Bifidobacterium longum Lactobacillus johnsonii Streptococcus sanguinis Lactobacillus casei Lactobacillus brevis Streptococcus gordonii Lactobacillus delbrueckii Group 98 Listeria welshimeri Listeria innocua Lactobacillus sakei Group 145 Pediococcus pentosaceus Lactobacillus sakei Group 157 Lactobacillus johnsonii Lactobacillus sakei Group 23 Yersinia pseudotuberculosis Listeria welshimeri Lactobacillus salivarius Yersinia pestis Lactobacillus johnsonii Listeria monocytogenes Salmonella enterica Aeromonas hydrophila Lawsonia intracellularis Shigella flexneri Corynebacterium jeikeium Listeria innocua Lactobacillus sakei	METABOLOMICS NUTRIENTS/ SUBSTRATES Ellagic acid [parent] D-Glucose [parent] CO2 [parent] α-Glucan [parent] ENDPRODUCTS Urolithins [parent] Lactate [parent] Acetylcholine [parent] γ-Amino butyric acid (GABA) [parent] Vitamin B12 [parent] Trimethylamine [parent] Lactic acid [parent] INHIBITED BY Stevia [parent] Laminaria hyperborea (curvie) [parent] Chemotherapy [parent] Magnesium-deficient diet [parent] Glyphosphate [parent] High fat diet [parent] Sucralose (Splenda) [parent] ENHANCED BY Sesame cake/meal [parent] Almonds/ almond skins [parent] Navy bean (Cooked) [parent] Magnesium [parent] Daesiho-tang (DSHT) [parent] Resveratrol [parent] Proton-pump inhibitors (PPI) [parent] Laminaria digitata (oarweed) [parent] Melatonin [parent] BIOTRANSFORMS Linoleic acid (LA) [parent] Linolenic acid (CLnA) [parent] BIOTRANFORM 10‐Hydroxy‐cis‐12‐octadecenoate (HYA) [parent] Trans-11 conjugate linoleic acid (CLA) [parent] Cis-9 conjugate linoleic acid (CLA) [parent] Cis-15 conjugate linolenic acids (CLnA) [parent] Cis-9 conjugate linolenic acids (CLnA) [parent] 10-Hydroxyoctadecanoate (HYB) [parent] Trans-11 conjugate linolenic acids (CLnA) [parent]
ANTIBIOTIC RESISTANCE See Parent Genus (Lactobacillus)	BIOFILM FORMERS See Parent Genus (Lactobacillus)	COGEM PATHOGENICITY See Parent Genus (Lactobacillus)

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