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Enterobacteriaceae

RANK: Family

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Gammaproteobacteria -> Enterobacteriales -> Enterobacteriaceae

OVERVIEW:

The 'Enterobacteriaceae' are a large family of Gram-negative bacteria that includes, along with many harmless symbionts, many of the more familiar pathogens, such as Salmonella, Escherichia coli, Yersinia pestis, Klebsiella and Shigella. Other disease-causing bacteria in this family include Proteus (bacterium) Proteus, Enterobacter, Serratia, and Citrobacter. This family is the only representative in the order Enterobacteriales of the class Gammaproteobacteria in the phylum Proteobacteria. Phylogenetically, in the Enterobacteriales, several peptidoglycan-less insect endosymbionts form a sister clade to the Enterobacteriaceae, but as they are not validly described, this group is not officially a taxon; examples of these species are Sodalis, Buchnera (proteobacteria). Intrapartum and neonatal antibiotic exposure increased the abundance of fecal Enterobacteriacaea during the first three months of life.

Microbial Abundance Data: Enterobacteriaceae (Percent of total population with standard deviation [PMID: 22698087])
Group 1				Group 2					Group 3			Group 4
Group 1 Avg	Buccal Mucosa	Keratinized Gingiva	Hard Palate	Group 2 Avg	Throat	Throat	Tonsils	Saliva	Group 3 Avg	Supragingival Plaque	Subgingival Plaque	Stool
0.025 % (0.097)	0.017 % (0.062)	0.007 % (0.043)	0.052 % (0.185)	0.033 % (0.177)	0.075 % (0.399)	0.011 % (0.047)	0.001 % (0.006)	0.046 % (0.258)	0.009 % (0.070)	0.003 % (0.020)	0.015 % (0.121)	0.159 % (0.957)

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Aranicola Arsenophonus Averyella Biostraticola Brenneria Buchnera Budvicia Buttiauxella Candidatus Aschnera Candidatus Curculioniphilus Candidatus Cuticobacterium Candidatus Gillettellia Candidatus Ishikawaella Candidatus Macropleicola Candidatus Moranella Candidatus Phlomobacter Candidatus Profftia Candidatus Riesia Candidatus Rohrkolberia Candidatus Schneideria Candidatus Stammerula Cedecea Chania Citrobacter Cosenzaea Cronobacter Dickeya Edwardsiella Enterobacter Erwinia Escherichia Ewingella Franconibacter Gibbsiella Grimontella Guhaiyinggella Hafnia Izhakiella Klebsiella Kluyvera Kosakonia Leclercia Lelliottia Leminorella Lonsdalea Mangrovibacter Margalefia Moellerella Morganella Obesumbacterium Pantoea Pectobacterium Phaseolibacter Photorhabdus Phytobacter Plesiomonas Pluralibacter Pragia Proteus Providencia Pseudocitrobacter Rahnella Raoultella Rosenbergiella Rouxiella Salmonella Samsonia Serratia Shigella Shimwellia Siccibacter Sodalis Tatumella Tiedjeia Trabulsiella Wigglesworthia Xenorhabdus Yersinia Yokenella environmental samples unclassified Enterobacteriaceae	INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae	KEGG PATHWAYS CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES Acetoin Iron supplements ENDPRODUCTS 2,3-Butanediol INHIBITED BY Pomegranate ellagitannins ENHANCED BY Aspartame Partial Sleep Deprivation [parent] BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE	BIOFILM FORMERS	COGEM PATHOGENICITY