Datapunk Opus23 | Ruminococcaceae

Ruminococcaceae

RANK: Family

TAXONOMY: cellular organisms -> Bacteria -> Terrabacteria group -> Firmicutes -> Clostridia -> Clostridiales -> Ruminococcaceae

OVERVIEW:

Ruminococcaceae are one of the most abundant families from the order Clostridiales found in the mammalian gut environment, and have been associated with the maintenance of gut health. They are anaerobic, Gram-positive gut microbes. One or more species in this genus are found in significant numbers in the intestines of humans. Arterial stiffness was found to correlate negatively with the abundance of Ruminococcaceae family bacteria. [PMID: 29750272]

Microbial Abundance Data: Ruminococcaceae (Percent of total population with standard deviation [PMID: 22698087])
Group 1				Group 2					Group 3			Group 4
Group 1 Avg	Buccal Mucosa	Keratinized Gingiva	Hard Palate	Group 2 Avg	Throat	Throat	Tonsils	Saliva	Group 3 Avg	Supragingival Plaque	Subgingival Plaque	Stool
0.036 % (0.135)	0.024 % (0.056)	0.009 % (0.043)	0.076 % (0.307)	0.045 % (0.255)	0.108 % (0.673)	0.030 % (0.159)	0.004 % (0.017)	0.038 % (0.171)	0.015 % (0.110)	0.002 % (0.005)	0.027 % (0.214)	14.547 % (11.938)

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Acetanaerobacterium Acetivibrio Anaerobacterium Anaerofilum Anaerotruncus Candidatus Soleaferrea Caproiciproducens Ercella Ethanoligenens Faecalibacterium Fastidiosipila Gemmiger Hydrogenoanaerobacterium Mageeibacillus Oscillospira Papillibacter Pseudobacteroides Ruminiclostridium Ruminococcus Saccharofermentans Sporobacter Subdoligranulum environmental samples unclassified Ruminococcaceae	INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Peptococcaceae Anaerostipes Bacteroidales Bacteroides Odoribacter Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae INHIBITED BY Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Bacteroidales Bacteroides Porphyromonadaceae Odoribacter Parabacteroides Porphyromonas Prevotella Rikenellaceae Alistipes Turicibacter Streptococcus Clostridiales Catabacteriaceae Clostridium Clostridiales incertae sedis Peptoniphilus Clostridiales Family XIII. Incertae Sedis Lachnospiraceae Blautia Lachnospiraceae Coprococcus Dorea Eubacterium Lachnobacterium Lachnospira Roseburia Lachnospiraceae Peptococcaceae Ruminococcaceae Ruminiclostridium Acetivibrio Eubacterium Faecalibacterium Oscillospira Ruminococcus Acidaminococcus Dialister Phascolarctobacterium Veillonella Rubrivivax Alcaligenaceae Oxalobacter Bilophila Desulfovibrio Campylobacteraceae Enterobacteriaceae Escherichia Erysipelotrichaceae Erysipelotrichaceae Holdemania Akkermansia	KEGG PATHWAYS CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS Butyrate [parent] INHIBITED BY High sugar diet [parent] Gallate High fat diet [parent] ENHANCED BY Walnuts Saccharomyces boulardii Quercetin w. Resveratrol Berberine Saccharin [parent] BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE	BIOFILM FORMERS	COGEM PATHOGENICITY

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