Datapunk Opus23 | Erwinia

Erwinia

RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Gammaproteobacteria -> Enterobacteriales -> Enterobacteriaceae -> Erwinia

OVERVIEW:

Straight rods, 0.5–1.0 × 1.0–3.0 µm; occur singly or in pairs. Gram negative. Motile by peritrichous flagella. Facultatively anaerobic, but anaerobic growth by some species is weak. Optimum temperature, 27–30°C; maximum temperature for growth is 40°C. Oxidase negative. Catalase positive. Pectinase negative. Acid is produced from fructose, d-galactose, d-glucose, and sucrose but not from adonitol, arabitol, dextrin, dulcitol, inulin, maltose, starch, and tagatose. Utilize fumarate, d-galactose, gluconate, d-glucose, glycerol, β-methylglucoside, malate, and succinate, but not l-arabitol, benzoate, butanol, methanol, oxalate, propionate, or sorbose as carbon- and energy-yielding sources. Utilize l-alanine, l-glutaminic acid, glycylglycine, and l-serine, but not kynureninic acid and trigonelline, as nitrogen sources. Sensitive to chloramphenicol, furazolidone, nalidixinic acid, oxytetracyline, and tetracycline. Do not possess arginine dihydrolase, caseinase, pectinase, phenylalanine deaminase, or urease. Associated with plants as pathogens, saprophytes, or constituents of the epiphytic flora.The mol% G + C of the DNA is: 49.8–54.1.Type species: Erwinia amylovora

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Candidatus Erwinia dacicola Erwinia amylovora Erwinia aphidicola Erwinia billingiae Erwinia carnegieana Erwinia chrysantum Erwinia endophytica Erwinia gerundensis Erwinia iniecta Erwinia mallotivora Erwinia oleae Erwinia papayae Erwinia persicina Erwinia piriflorinigrans Erwinia psidii Erwinia pyrifoliae Erwinia rhapontici Erwinia soli Erwinia sp. Erwinia tasmaniensis Erwinia toletana Erwinia tracheiphila Erwinia typographi Erwinia uzenensis environmental samples	INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae	KEGG PATHWAYS 2-Oxocarboxylic acid metabolism ABC transporters Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Aminobenzoate degradation Arachidonic acid metabolism Arginine and proline metabolism Arginine biosynthesis Ascorbate and aldarate metabolism Bacterial chemotaxis Bacterial secretion system Base excision repair Benzoate degradation Biosynthesis of amino acids Biosynthesis of antibiotics Biosynthesis of secondary metabolites Biosynthesis of unsaturated fatty acids Biotin metabolism Butanoate metabolism C5-Branched dibasic acid metabolism Caprolactam degradation Carbapenem biosynthesis Carbon metabolism Cationic antimicrobial peptide (CAMP) resistance Chloroalkane and chloroalkene degradation Chlorocyclohexane and chlorobenzene degradation Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Glutamine and D-glutamate metabolism DNA replication Degradation of aromatic compounds Ether lipid metabolism Fatty acid biosynthesis Fatty acid degradation Fatty acid metabolism Flagellar assembly Fluorobenzoate degradation Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Geraniol degradation Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Histidine metabolism Homologous recombination Inositol phosphate metabolism Insulin resistance Limonene and pinene degradation Lipoic acid metabolism Lipopolysaccharide biosynthesis Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Monobactam biosynthesis Naphthalene degradation Nicotinate and nicotinamide metabolism Nitrogen metabolism Nitrotoluene degradation Novobiocin biosynthesis Nucleotide excision repair One carbon pool by folate Other glycan degradation Oxidative phosphorylation Pantothenate and CoA biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phenylalanine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Phosphotransferase system (PTS) Polyketide sugar unit biosynthesis Porphyrin and chlorophyll metabolism Propanoate metabolism Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism RNA degradation RNA polymerase Riboflavin metabolism Ribosome Selenocompound metabolism Starch and sucrose metabolism Streptomycin biosynthesis Sulfur metabolism Sulfur relay system Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Thiamine metabolism Toluene degradation Tryptophan metabolism Two-component system Tyrosine metabolism Ubiquinone and other terpenoid-quinone biosynthesis Valine, leucine and isoleucine biosynthesis Valine, leucine and isoleucine degradation Vancomycin resistance Vitamin B6 metabolism alpha-Linolenic acid metabolism beta-Alanine metabolism beta-Lactam resistance CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES Iron supplements [parent] Acetoin [parent] ENDPRODUCTS 2,3-Butanediol [parent] INHIBITED BY Pomegranate ellagitannins [parent] ENHANCED BY Aspartame [parent] BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE Streptomycin (aph6id) Aminoglycoside (acrb) Glycylcycline (acrb) Macrolide (acrb) Beta lactam (acrb) Acriflavin (acrb) Streptomycin (aph33ib) Sulfonamide (sul2) Cephalosporin (bl2b_tem) Penicillin (bl2b_tem)	BIOFILM FORMERS Erwinia billingiae Erwinia amylovora	COGEM PATHOGENICITY Erwinia tracheiphila (1) Erwinia tasmaniensis (1) Erwinia pyrifoliae (1) Erwinia toletana (1) Erwinia amylovora (1) Erwinia sp Ejp617 (1)

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