environmental samples

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TAXONOMY: Terrabacteria group -> Firmicutes -> Clostridia -> Clostridiales -> Ruminococcaceae -> Faecalibacterium -> environmental samples

OVERVIEW:





TAGS
Keystone Core species Type species Pathogen Dysbiosis associated Flora/ commensal Gut associated Probiotic
Leanness Obesity Skin microbiome Fecal distribution Oral microbiome Vaginal microbiome Butyrate producer Catalase producer
Histamine producer Food fermenter Amylolytic Propionate producer Nitrifying
INTERACTIONS
 KEGG PATHWAYS

CLUSTERS WITH
METABOLOMICS       
NUTRIENTS/ SUBSTRATES
  • Riboflavin [parent]
  • D-Glucose [parent]
  • Arabinogalactan [parent]
  • N-Acetyl-D-glucosamine [parent]
  • Acetate [parent]
  • Pectin [parent]
  • Galacturonic acid [parent]
  • Inulin [parent]
  • Raffinose [parent]
  • Stachyose (soy oligosaccharide) [parent]

    • ENDPRODUCTS
  • D-lactate [parent]
  • Formate [parent]
  • Butyrate [parent]

    • INHIBITED BY
  • High animal protein diet [parent]
  • Chemotherapy [parent]
  • High sugar diet [parent]
  • Low fiber diet [parent]
  • Bile salts [parent]
  • Omega 3 fatty acids [parent]
  • Navy bean (Cooked) [parent]
  • High fat diet [parent]
  • Resistant starch (type IV) [parent]
  • Fructo-oligosaccharides [parent]
  • High processed foods diet [parent]
  • Flaxseed [parent]
  • High animal fat diet [parent]
  • Low FODMAP diet [parent]

    • ENHANCED BY
  • Jerusalem artichoke [parent]
  • Arabinogalactan [parent]
  • Red wine [parent]
  • Low processed foods diet [parent]
  • Low animal protein diet [parent]
  • Epinephrine [parent]
  • Dopamine [parent]
  • Chicory [parent]
  • Resistant starch (type III) [parent]
  • High fiber diet [parent]
  • Inulin [parent]
  • Fasting [parent]

    • BIOTRANSFORMS

    BIOTRANFORM
    ANTIBIOTIC RESISTANCE   
    		BIOFILM FORMERS   
    		COGEM PATHOGENICITY   
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