Desulfotomaculum

   RANK: Genus

TAXONOMY: Bacteria -> Terrabacteria group -> Firmicutes -> Clostridia -> Clostridiales -> Peptococcaceae -> Desulfotomaculum

OVERVIEW:

'Desulfotomaculum' is a genus of Gram-positive, obligately anaerobic soil bacteria. A type of sulfate-reducing bacteria, Desulfotomaculum can cause food spoilage in poorly processed canned foods . Their presence can be identified by the release of hydrogen sulfide gas with its rotten egg smell when the can is first opened. They are endospore-forming bacteria . A new strain of Desulfotomaculum was discovered in 2005 during drilling 2.8 km deep in the Mponeng gold mine in South Africa. The strain, found in water which has been isolated for tens of millions of years, exists completely independent of photosynthesis. The bacteria uses radiolytically- produced H2, which is generated in that environment by the energy released by radioisotopes, as well as SO42− which may be generated both by the energy released by radioisotopes as well as by other chemical reactions, to form hydrogen sulfide, H2S, which replaces the hydrogen bonds produced by normal photosynthesis. This discovery holds great promise, as it proves that organisms can obtain energy from sources other than from the sun, which means similar life-forms may be found on other planets in the Solar System. Desulfotomaculum are straight or curved rods, are highly heat resistant and a free-living fixer of atmospheric nitrogen. They are motile with a peritrichous flagella and are common inhabitants of soil, water, geothermal run-off, insect intestines and in rumen. They also cause 'sulphide stinker' spoilage of canned foods.



TAGS
Keystone Core species Type species Pathogen Dysbiosis associated Flora/ commensal Gut associated Probiotic
Leanness Obesity Skin microbiome Fecal distribution Oral microbiome Vaginal microbiome Butyrate producer Catalase producer
Histamine producer Food fermenter Amylolytic Propionate producer Nitrifying
DESCENDANTS
  • Desulfotomaculum acetoxidans
  • Desulfotomaculum aeronauticum
  • Desulfotomaculum alcoholivorax
  • Desulfotomaculum alkaliphilum
  • Desulfotomaculum arcticum
  • Desulfotomaculum australicum
  • Desulfotomaculum defluvii
  • Desulfotomaculum geothermicum
  • Desulfotomaculum gibsoniae
  • Desulfotomaculum halophilum
  • Desulfotomaculum hydrothermale
  • Desulfotomaculum intricatum
  • Desulfotomaculum kuznetsovii
  • Desulfotomaculum luciae
  • Desulfotomaculum nigrificans
  • Desulfotomaculum peckii
  • Desulfotomaculum putei
  • Desulfotomaculum reducens
  • Desulfotomaculum ruminis
  • Desulfotomaculum salinum
  • Desulfotomaculum sapomandens
  • Desulfotomaculum solfataricum
  • Desulfotomaculum sp.
  • Desulfotomaculum thermoacetoxidans
  • Desulfotomaculum thermobenzoicum
  • Desulfotomaculum thermocisternum
  • Desulfotomaculum thermosapovorans
  • Desulfotomaculum thermosubterraneum
  • Desulfotomaculum tongense
  • Desulfotomaculum varum
  • environmental samples
  • INTERACTIONS
    ENHANCES
  • Bacteroidales
  • Bacteroides
  • Odoribacter
  • Peptococcaceae

  • INHIBITS
  • Bifidobacterium
  • Coriobacteriales
  • Adlercreutzia
  • Collinsella
  • Porphyromonas
  • Prevotella
  • Clostridium
  • Clostridiales incertae sedis
  • Clostridiales Family XIII. Incertae Sedis
  • Blautia
  • Coprococcus
  • Dorea
  • Lachnospiraceae
  • Ruminococcaceae
  • Ruminococcus
  • Dialister
  • Campylobacteraceae
  • Erysipelotrichaceae

  • ENHANCED BY
  • Bifidobacterium
  • Coriobacteriales
  • Adlercreutzia
  • Collinsella
  • Bacteroidales
  • Bacteroides
  • Porphyromonadaceae
  • Odoribacter
  • Parabacteroides
  • Porphyromonas
  • Prevotella
  • Rikenellaceae
  • Alistipes
  • Turicibacter
  • Streptococcus
  • Clostridiales
  • Catabacteriaceae
  • Clostridium
  • Clostridiales incertae sedis
  • Peptoniphilus
  • Clostridiales Family XIII. Incertae Sedis
  • Lachnospiraceae
  • Blautia
  • Lachnospiraceae
  • Coprococcus
  • Dorea
  • Eubacterium
  • Lachnobacterium
  • Lachnospira
  • Roseburia
  • Lachnospiraceae
  • Peptococcaceae
  • Ruminococcaceae
  • Ruminiclostridium
  • Acetivibrio
  • Eubacterium
  • Faecalibacterium
  • Oscillospira
  • Ruminococcus
  • Acidaminococcus
  • Dialister
  • Phascolarctobacterium
  • Veillonella
  • Rubrivivax
  • Alcaligenaceae
  • Oxalobacter
  • Bilophila
  • Desulfovibrio
  • Campylobacteraceae
  • Enterobacteriaceae
  • Escherichia
  • Erysipelotrichaceae
  • Erysipelotrichaceae
  • Holdemania
  • Akkermansia
  • KEGG PATHWAYS
  • 2-Oxocarboxylic acid metabolism
  • ABC transporters
  • Acarbose and validamycin biosynthesis
  • Alanine, aspartate and glutamate metabolism
  • Amino sugar and nucleotide sugar metabolism
  • Aminoacyl-tRNA biosynthesis
  • Arginine and proline metabolism
  • Arginine biosynthesis
  • Bacterial chemotaxis
  • Bacterial secretion system
  • Base excision repair
  • Biosynthesis of amino acids
  • Biosynthesis of antibiotics
  • Biosynthesis of secondary metabolites
  • Biosynthesis of unsaturated fatty acids
  • Biotin metabolism
  • Butanoate metabolism
  • C5-Branched dibasic acid metabolism
  • Carbapenem biosynthesis
  • Carbon fixation pathways in prokaryotes
  • Carbon metabolism
  • Cationic antimicrobial peptide (CAMP) resistance
  • Chloroalkane and chloroalkene degradation
  • Chlorocyclohexane and chlorobenzene degradation
  • Citrate cycle (TCA cycle)
  • Cysteine and methionine metabolism
  • D-Alanine metabolism
  • D-Glutamine and D-glutamate metabolism
  • DNA replication
  • Degradation of aromatic compounds
  • Fatty acid biosynthesis
  • Fatty acid degradation
  • Fatty acid metabolism
  • Flagellar assembly
  • Folate biosynthesis
  • Fructose and mannose metabolism
  • Galactose metabolism
  • Glutathione metabolism
  • Glycerolipid metabolism
  • Glycerophospholipid metabolism
  • Glycine, serine and threonine metabolism
  • Glycolysis / Gluconeogenesis
  • Glyoxylate and dicarboxylate metabolism
  • Histidine metabolism
  • Homologous recombination
  • Inositol phosphate metabolism
  • Lysine biosynthesis
  • Metabolic pathways
  • Methane metabolism
  • Microbial metabolism in diverse environments
  • Mismatch repair
  • Monobactam biosynthesis
  • Naphthalene degradation
  • Nicotinate and nicotinamide metabolism
  • Nitrogen metabolism
  • Nitrotoluene degradation
  • Non-homologous end-joining
  • Novobiocin biosynthesis
  • Nucleotide excision repair
  • One carbon pool by folate
  • Oxidative phosphorylation
  • Pantothenate and CoA biosynthesis
  • Pentose and glucuronate interconversions
  • Pentose phosphate pathway
  • Peptidoglycan biosynthesis
  • Phenylalanine metabolism
  • Phenylalanine, tyrosine and tryptophan biosynthesis
  • Phosphonate and phosphinate metabolism
  • Polyketide sugar unit biosynthesis
  • Porphyrin and chlorophyll metabolism
  • Propanoate metabolism
  • Protein export
  • Purine metabolism
  • Pyrimidine metabolism
  • Pyruvate metabolism
  • Quorum sensing00253
  • RNA degradation
  • RNA polymerase
  • Riboflavin metabolism
  • Ribosome
  • Selenocompound metabolism
  • Starch and sucrose metabolism
  • Streptomycin biosynthesis
  • Sulfur metabolism
  • Sulfur relay system
  • Taurine and hypotaurine metabolism
  • Terpenoid backbone biosynthesis
  • Thiamine metabolism
  • Two-component system
  • Tyrosine metabolism
  • Ubiquinone and other terpenoid-quinone biosynthesis
  • Valine, leucine and isoleucine biosynthesis
  • Valine, leucine and isoleucine degradation
  • Vancomycin resistance
  • Vitamin B6 metabolism
  • beta-Alanine metabolism
  • beta-Lactam resistance

  • CLUSTERS WITH
    METABOLOMICS       
    NUTRIENTS/ SUBSTRATES

    ENDPRODUCTS

    INHIBITED BY
  • Gallate [parent]
  • Cranberry bean flour [parent]

  • ENHANCED BY
  • Walnuts [parent]

  • BIOTRANSFORMS

    BIOTRANFORM
    ANTIBIOTIC RESISTANCE   
    BIOFILM FORMERS   
    COGEM PATHOGENICITY   

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