Datapunk Opus23 | Bifidobacterium animalis

Bifidobacterium animalis

RANK: Species

TAXONOMY: Terrabacteria group -> Actinobacteria -> Actinobacteria -> Bifidobacteriales -> Bifidobacteriaceae -> Bifidobacterium -> Bifidobacterium animalis

OVERVIEW:

'Bifidobacterium animalis' is a Gram-positive anaerobic rod-shaped bacterium which can be found in the large intestines of most mammals, including humans. Bifidobacterium animalis and Bifidobacterium lactis were previously described as two distinct species. Presently, both are considered B. animalis with the subspecies Bifidobacterium animalis subsp animalis and Bifidobacterium animalis subsp lactis. Bifidobacterium animalis, B. longum-a, and B. pseudolongum deconjugate malonyl-, acetyl- and β-glucoside conjugates of daidzin, which are found in soy milk, to produce daidzein. These strains are also reported to transform daidzein to equol in soy milk [PMC 4381290]. Identified as a constituent of the oral microbiome by Human Oral Microbiome Database. Consumption of probiotic bacteria such as Bifidobacterium animalis subsp Lactis, Streptococcus thermophiles, Lactobacillus bulgaricus, and Lactococcus lactis subsp Lactis appeared to make study participants less prone to anxiety. B. animalis (coefficient=-0.84; 95% CI -1.61 to -0.07; P=0.03) and M. smithii (coefficient=-0.43, 95% CI -0.90 to 0.05; P=0.08) were negatively associated with the BMI. [PMID: 23459324]

This species has been identified as a resident in the human gastrointestinal tract based on the phylogenetic framework of its small subunit ribosomal RNA gene sequences.[PMC 4262072]

COGEM

COGEM released a comprehensive database of pathogenicity assessment of around 2575 bacterial species in 2011. The database ranks the pathogenicity of species on a scale of 1 to 4. Bifidobacterium animalis ranks on this scale:

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying	Biofilm producer

INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Roseburia Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae INHIBITED BY Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Bacteroidales Bacteroides Porphyromonadaceae Odoribacter Parabacteroides Porphyromonas Prevotella Rikenellaceae Alistipes Turicibacter Streptococcus Clostridiales Catabacteriaceae Clostridium Clostridiales incertae sedis Peptoniphilus Clostridiales Family XIII. Incertae Sedis Lachnospiraceae Blautia Lachnospiraceae Coprococcus Dorea Eubacterium Lachnobacterium Lachnospira Roseburia Lachnospiraceae Peptococcaceae Ruminococcaceae Ruminiclostridium Acetivibrio Eubacterium Faecalibacterium Oscillospira Ruminococcus Acidaminococcus Dialister Phascolarctobacterium Veillonella Rubrivivax Alcaligenaceae Oxalobacter Bilophila Desulfovibrio Campylobacteraceae Enterobacteriaceae Escherichia Erysipelotrichaceae Erysipelotrichaceae Holdemania Akkermansia	KEGG PATHWAYS CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES D-Glucose [parent] Resistant starch (type II) Daidzin Ellagic acid [parent] Raffinose [parent] Oxalate Stachyose (soy oligosaccharide) [parent] Taraxacum officinale (dandelion root) [parent] ENDPRODUCTS Urolithins [parent] γ-Amino butyric acid (GABA) [parent] Folate [parent] Daidzein Biotin [parent] Lactic acid [parent] INHIBITED BY Laminaria hyperborea (curvie) [parent] Chemotherapy [parent] Magnesium-deficient diet [parent] Low carbohydrate diet [parent] Glyphosphate [parent] High fat diet [parent] Ascophyllum nodosum (rockweed) [parent] Berberine [parent] Sucralose (Splenda) [parent] Low FODMAP diet [parent] ENHANCED BY Red wine [parent] Navy bean (Cooked) [parent] Resistant starch (type III) [parent] Ketogenic diet [parent] Chondrus crispus (red seaweed) [parent] Inulin [parent] Resveratrol [parent] Almonds/ almond skins [parent] Sesame cake/meal [parent] Green tea [parent] Jerusalem artichoke [parent] Fructo-oligosaccharides [parent] Chicory [parent] Magnesium [parent] Arabinoxylans [parent] Daesiho-tang (DSHT) [parent] BIOTRANSFORMS Daidzein [parent] Linoleic acid (LA) [parent] Linolenic acid (CLnA) [parent] Ginsenoside Rb1 [parent] Daidzein BIOTRANFORM Trans-11 conjugate linoleic acid (CLA) [parent] Cis-9 conjugate linoleic acid (CLA) [parent] Equol sulphate [parent] Cis-15 conjugate linolenic acids (CLnA) [parent] Cis-9 conjugate linolenic acids (CLnA) [parent] Equol sulphate Trans-11 conjugate linolenic acids (CLnA) [parent]
ANTIBIOTIC RESISTANCE See Parent Genus (Bifidobacterium)	BIOFILM FORMERS See Parent Genus (Bifidobacterium)	COGEM PATHOGENICITY See Parent Genus (Bifidobacterium)

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