Datapunk Opus23 | Bacteroides plebeius

Bacteroides plebeius

RANK: Species

TAXONOMY: Bacteroidetes/Chlorobi group -> Bacteroidetes -> Bacteroidia -> Bacteroidales -> Bacteroidaceae -> Bacteroides -> Bacteroides plebeius

OVERVIEW:

Bacteroides plebeius in known to digest complex carbohydrates in seaweed, and likely acquired this ability via horizontal gene transfer from a marine bacterium many centuries ago. Thus it is not surprising that foreign-born Korean participants in our study were the only group with enrichment of Bacteroides plebeius, being the only group under study with seaweed as a regular dietary component ... Bacteroides plebeiusm, a seaweed-degrading bacterium, was strongly enriched in foreign-born Koreans, while Prevotella copri and Bifidobacterium adolescentis were strongly enriched in foreign-born Koreans and Hispanics … Dietary acculturation may result in loss of native species in immigrants [ISME Journal. 2020 Jul;14(7):1639-1650].

Identified as constituent of vaginal microbiome. [PMID:23282177]

This species has been identified as a resident in the human gastrointestinal tract based on the phylogenetic framework of its small subunit ribosomal RNA gene sequences.[PMC 4262072]

COGEM

COGEM released a comprehensive database of pathogenicity assessment of around 2575 bacterial species in 2011. The database ranks the pathogenicity of species on a scale of 1 to 4. Bacteroides plebeius ranks on this scale:

Identified as a 'core species' of the human gut microbiome. [PMID: 23222524]

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying	Biofilm producer

INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae ENHANCED BY Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Bacteroidales Bacteroides Porphyromonadaceae Odoribacter Parabacteroides Porphyromonas Prevotella Rikenellaceae Alistipes Turicibacter Streptococcus Clostridiales Catabacteriaceae Clostridium Clostridiales incertae sedis Peptoniphilus Clostridiales Family XIII. Incertae Sedis Lachnospiraceae Blautia Lachnospiraceae Coprococcus Dorea Eubacterium Lachnobacterium Lachnospira Roseburia Lachnospiraceae Peptococcaceae Ruminococcaceae Ruminiclostridium Acetivibrio Eubacterium Faecalibacterium Oscillospira Ruminococcus Acidaminococcus Dialister Phascolarctobacterium Veillonella Rubrivivax Alcaligenaceae Oxalobacter Bilophila Desulfovibrio Campylobacteraceae Enterobacteriaceae Escherichia Erysipelotrichaceae Erysipelotrichaceae Holdemania Akkermansia	KEGG PATHWAYS CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY Polymannuronic acid [parent] Low carbohydrate diet [parent] Whole-grain barley [parent] β-Glucan [parent] Walnuts [parent] Ketogenic diet [parent] Momordia charantia [parent] Sucralose (Splenda) [parent] ENHANCED BY Low fat diets [parent] Red wine [parent] L-citrulline [parent] β-Glucan [parent] Resistant starch (type IV) [parent] Fructo-oligosaccharides [parent] Stevia [parent] High meat diet [parent] Tannic acid [parent] Gallic acid [parent] Schisandra chinensis [parent] Saccharin [parent] BIOTRANSFORMS Ginsenoside Rb1 [parent] BIOTRANFORM
ANTIBIOTIC RESISTANCE See Parent Genus (Bacteroides)	BIOFILM FORMERS See Parent Genus (Bacteroides)	COGEM PATHOGENICITY See Parent Genus (Bacteroides)

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