Salmonella

RANK: Genus

TAXONOMY: cellular organisms -> Bacteria -> Proteobacteria -> Gammaproteobacteria -> Enterobacteriales -> Enterobacteriaceae -> Salmonella

OVERVIEW:

Salmonella /ˌsælməˈnɛlə/ is a genus of rod-shaped (bacillus) gram-negative bacteria of the Enterobacteriaceae family. The two species of Salmonella are Salmonella enterica and Salmonella bongori. Salmonella enterica is the type species and is further divided into six subspecies[1]that include over 2500 serovars. S. enterica subspecies are found worldwide in all warm-blooded animals, and in the environment. S. bongori is restricted to cold-blooded animals particularly reptiles.Strains of Salmonella cause illnesses such as typhoid fever, paratyphoid fever, and food poisoning (salmonellosis). Most species of Salmonella are lysine decarboxylase (LDC) positive.

This genus contains microbial species that can reside in the human gastrointestinal tract. [PMC 4262072]


Pathogen
Gut associated
Name
Rank
Client %
Avg %
Avg StdDev
Client StdDev
Salmonella
genus
atypical
atypical
DESCENDANTS
INTERACTIONS
METABOLOMICS   
Substrates/ Growth Factors
  • L-Lysine
  • Iron supplements [parent]
  • Acetoin [parent]

  • Metabolic Endproducts
  • 2,3-Butanediol [parent]
  • Cadaverine

  • Growth Inhibited by
  • Curcuma longa
  • Aloe vera
  • Plantain bananas
  • Garlic (allicin)
  • Pomegranate ellagitannins [parent]
  • Sarcodiotheca gaudichaudii (red seaweed)
  • Hyocyamine

  • Growth Enhanced By
  • Aspartame [parent]
  • Berberine

  • Antibiotic Resistance
  • Aminoglycoside (acrb)
  • Glycylcycline (acrb)
  • Macrolide (acrb)
  • Beta lactam (acrb)
  • Acriflavin (acrb)
  • Macrolide (mpha)
  • Chloramphenicol (cml_e1)
  • Paromomycin (aph3ia)
  • Neomycin (aph3ia)
  • Kanamycin (aph3ia)
  • Ribostamycin (aph3ia)
  • Lividomycin (aph3ia)
  • Gentamincin b (aph3ia)
  • Fluoroquinolone (qnrb)
  • Astromicin (aac3ia)
  • Sisomicin (aac3ia)
  • Gentamicin (aac3ia)
  • Sulfonamide (sul1)
  • Chloramphenicol (cml_e3)
  • Trimethoprim (dfra19)
  • Monobactam (bl2be_shv2)
  • E cephalosproin (bl2be_shv2)
  • Penicillin (bl2be_shv2)
  • N cephalosproin (bl2be_shv2)
  • Tobramycin (aac6ib)
  • Netilmicin (aac6ib)
  • Isepamicin (aac6ib)
  • Amikacin (aac6ib)
  • Sisomicin (aac6ib)
  • Dibekacin (aac6ib)
  • Cephamycin (bl2_kpc)
  • Cephalosporin (bl2_kpc)
  • Penicillin (bl2_kpc)
  • Carbapenem (bl2_kpc)
  • Bacitracin (baca)
  • Streptomycin (aph6id)
  • Fluoroquinolone (qnra)
  • Cloxacillin (bl2d_oxa2)
  • Penicillin (bl2d_oxa2)
  • Sisomicin (aac3vi)
  • Gentamicin (aac3vi)
  • Chloramphenicol (cata2)
  • Aminoglycoside (acra)
  • Glycylcycline (acra)
  • Macrolide (acra)
  • Beta lactam (acra)
  • Acriflavin (acra)
  • Tetracycline (tetg)
  • Cephamycin (bl1_cmy2)
  • Cephalosporin (bl1_cmy2)
  • Ceftriaxone (bl1_cmy2)
  • Cefoxitin (bl1_cmy2)
  • Carbapenem (bl1_cmy2)
  • Ceftazidime (bl1_cmy2)
  • T chloride (mdtp)
  • Acriflavine (mdtp)
  • Puromycin (mdtp)
  • Trimethoprim (dfra21)
  • Trimethoprim (dfra23)
  • Kasugamycin (ksga)
  • Fluoroquinolone (qnrs)
  • Trimethoprim (dfra5)
  • Monobactam (bl2be_per)
  • E cephalosproin (bl2be_per)
  • Penicillin (bl2be_per)
  • N cephalosproin (bl2be_per)
  • Monobactam (bl2be_ctxm)
  • Cephalosporin ii (bl2be_ctxm)
  • Cephalosporin iii (bl2be_ctxm)
  • Penicillin (bl2be_ctxm)
  • Cephalosporin i (bl2be_ctxm)
  • Ceftazidime (bl2be_ctxm)
  • Aminoglycoside (tolc)
  • Glycylcycline (tolc)
  • Macrolide (tolc)
  • Beta lactam (tolc)
  • Acriflavin (tolc)
  • Sulfonamide (sul3)
  • Enoxacin (mdtk)
  • Norfloxacin (mdtk)
  • Trimethoprim (dfra17)
  • Cloxacillin (bl2d_oxa1)
  • Penicillin (bl2d_oxa1)
  • Tobramycin (aac3iia)
  • Netilmicin (aac3iia)
  • Sisomicin (aac3iia)
  • Gentamicin (aac3iia)
  • Dibekacin (aac3iia)
  • Cephalosporin ii (bl2b_tem1)
  • Penicillin (bl2b_tem1)
  • Cephalosporin i (bl2b_tem1)
  • Chloramphenicol (catb3)
  • Trimethoprim (dfra10)
  • Penicillin (pbp2)
  • Trimethoprim (dfra16)
  • Chloramphenicol (cata1)
  • Tetracycline (tetd)
  • T chloride (mdtn)
  • Acriflavine (mdtn)
  • Puromycin (mdtn)
  • Trimethoprim (dfra7)
  • Chloramphenicol (mdtm)
  • Acriflavine (mdtm)
  • Norfloxacin (mdtm)
  • Spectinomycin (ant3ia)
  • Streptomycin (ant3ia)
  • Trimethoprim (dfra12)
  • Erythromycin (erea)
  • Tetracycline (tetc)
  • Trimethoprim (dfra14)
  • Tobramycin (ant2ia)
  • Sisomicin (ant2ia)
  • Kanamycin (ant2ia)
  • Gentamicin (ant2ia)
  • Dibekacin (ant2ia)
  • Chloramphenicol (catb2)
  • Deoxycholate (mdth)
  • Fosfomycin (mdth)
  • Trimethoprim (dfra15)
  • Deoxycholate (mdtg)
  • Fosfomycin (mdtg)
  • Sulfonamide (sul2)
  • Trimethoprim (dfra1)
  • Trimethoprim (dfrb6)
  • Macrolide (maca)
  • Cephalosporin (bl1_acc)
  • E penicillin (bl1_acc)
  • Macrolide (macb)
  • Tetracycline (teta)
  • Tetracycline (tetb)
  • Trimethoprim (dfra25)
  • Tobramycin (aac6iia)
  • Netilmicin (aac6iia)
  • Sisomicin (aac6iia)
  • Gentamicin (aac6iia)
  • Dibekacin (aac6iia)
  • Tobramycin (aac3iv)
  • Netilmicin (aac3iv)
  • Sisomicin (aac3iv)
  • Gentamicin (aac3iv)
  • Dibekacin (aac3iv)
  • Apramycin (aac3iv)
  • Cephalosporin (bl2b_tem)
  • Penicillin (bl2b_tem)
  • Carbenicillin (bl2c_pse1)
  • Penicillin (bl2c_pse1)
  • Streptomycin (aph33ib)