Datapunk Opus23 | Erysipelothrix

Erysipelothrix

RANK: Genus

TAXONOMY: Bacteria -> Terrabacteria group -> Firmicutes -> Erysipelotrichia -> Erysipelotrichales -> Erysipelotrichaceae -> Erysipelothrix

OVERVIEW:

Straight, or slightly curved, slender rods with a tendency to form long filaments. Rods usually 0.2–0.4 µm to 0.8–2.5 µm or 0.5 µm in diameter and 1.5–3.0 µm in length with rounded ends; occur singly in short chains, in pairs at an angle to give V-forms, or in groups with no particular arrangement. Filaments may be 60 µm or more in length. Nonmotile. Capsules not formed. Do not form spores. Gram-positive. Not acid-fast. Facultatively anaerobic. Colonies small, usually transparent and nonpigmented. Narrow zones of α-hemolysis may occur on blood agar. No β-hemolysis. Optimum temperature 30–37 °C; growth occurs between 5 and 42 °C. Do not survive heating at 60 °C for 15 min. Catalase-negative. Oxidase-negative. Fermentative activity weak. Acid but no gas produced from glucose and certain other carbohydrates. Organic growth factors are required. Cell wall contains a group B peptidoglycan based on lysine. Mycolic acids not present. The fatty acids are primarily of the straight chain mono-unsaturated (C18:1 cis-9) and straight chain saturated series (C16:0, C18:0). Widely distributed in nature. May be parasitic on mammals, birds and fish; some strains pathogenic for mammals and birds.

DNA G+C content (mol%): 36–40 (Tm, Bd).

Type species: Erysipelothrix rhusiopathiae

Microbial Abundance Data: Erysipelothrix (Percent of total population with standard deviation [PMID: 22698087])
Group 1				Group 2					Group 3			Group 4
Group 1 Avg	Buccal Mucosa	Keratinized Gingiva	Hard Palate	Group 2 Avg	Throat	Throat	Tonsils	Saliva	Group 3 Avg	Supragingival Plaque	Subgingival Plaque	Stool
0.000 % (0.001)	0.000 % (0.001)	0.000 % (0.001)	0.000 % (0.001)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)	0.000 % (0.000)

TAGS

Keystone	Core species	Type species	Pathogen	Dysbiosis associated	Flora/ commensal	Gut associated	Probiotic
Leanness	Obesity	Skin microbiome	Fecal distribution	Oral microbiome	Vaginal microbiome	Butyrate producer	Catalase producer
Histamine producer	Food fermenter	Amylolytic	Propionate producer	Nitrifying

DESCENDANTS Erysipelothrix inopinata Erysipelothrix muris Erysipelothrix rhusiopathiae Erysipelothrix sp. Erysipelothrix tonsillarum environmental samples	INTERACTIONS ENHANCES Bacteroidales Bacteroides Odoribacter Peptococcaceae Bacteroidales Bacteroides Odoribacter Peptococcaceae INHIBITS Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Porphyromonas Prevotella Clostridium Clostridiales incertae sedis Clostridiales Family XIII. Incertae Sedis Blautia Coprococcus Dorea Lachnospiraceae Ruminococcaceae Ruminococcus Dialister Campylobacteraceae Erysipelotrichaceae INHIBITED BY Bifidobacterium Coriobacteriales Adlercreutzia Collinsella Bacteroidales Bacteroides Porphyromonadaceae Odoribacter Parabacteroides Porphyromonas Prevotella Rikenellaceae Alistipes Turicibacter Streptococcus Clostridiales Catabacteriaceae Clostridium Clostridiales incertae sedis Peptoniphilus Clostridiales Family XIII. Incertae Sedis Lachnospiraceae Blautia Lachnospiraceae Coprococcus Dorea Eubacterium Lachnobacterium Lachnospira Roseburia Lachnospiraceae Peptococcaceae Ruminococcaceae Ruminiclostridium Acetivibrio Eubacterium Faecalibacterium Oscillospira Ruminococcus Acidaminococcus Dialister Phascolarctobacterium Veillonella Rubrivivax Alcaligenaceae Oxalobacter Bilophila Desulfovibrio Campylobacteraceae Enterobacteriaceae Escherichia Erysipelotrichaceae Erysipelotrichaceae Holdemania Akkermansia	KEGG PATHWAYS ABC transporters Alanine, aspartate and glutamate metabolism Amino sugar and nucleotide sugar metabolism Aminoacyl-tRNA biosynthesis Arginine and proline metabolism Arginine biosynthesis Ascorbate and aldarate metabolism Bacterial secretion system Base excision repair Benzoate degradation Biosynthesis of amino acids Biosynthesis of antibiotics Biosynthesis of secondary metabolites Biotin metabolism Butanoate metabolism Carbapenem biosynthesis Carbon metabolism Chloroalkane and chloroalkene degradation Chlorocyclohexane and chlorobenzene degradation Citrate cycle (TCA cycle) Cyanoamino acid metabolism Cysteine and methionine metabolism D-Alanine metabolism D-Glutamine and D-glutamate metabolism DNA replication Degradation of aromatic compounds Fatty acid degradation Fatty acid metabolism Folate biosynthesis Fructose and mannose metabolism Galactose metabolism Glutathione metabolism Glycerolipid metabolism Glycerophospholipid metabolism Glycine, serine and threonine metabolism Glycolysis / Gluconeogenesis Glyoxylate and dicarboxylate metabolism Homologous recombination Inositol phosphate metabolism Lysine biosynthesis Lysine degradation Metabolic pathways Methane metabolism Microbial metabolism in diverse environments Mismatch repair Naphthalene degradation Nicotinate and nicotinamide metabolism Nitrogen metabolism Nucleotide excision repair One carbon pool by folate Other glycan degradation Oxidative phosphorylation Pantothenate and CoA biosynthesis Pentose and glucuronate interconversions Pentose phosphate pathway Peptidoglycan biosynthesis Phosphotransferase system (PTS) Porphyrin and chlorophyll metabolism Propanoate metabolism Protein export Purine metabolism Pyrimidine metabolism Pyruvate metabolism Quorum sensing00253 RNA degradation RNA polymerase Riboflavin metabolism Ribosome Secondary bile acid biosynthesis Selenocompound metabolism Sphingolipid metabolism Starch and sucrose metabolism Streptomycin biosynthesis Sulfur metabolism Sulfur relay system Synthesis and degradation of ketone bodies Taurine and hypotaurine metabolism Terpenoid backbone biosynthesis Thiamine metabolism Tryptophan metabolism Two-component system Valine, leucine and isoleucine degradation Vancomycin resistance Xylene degradation CLUSTERS WITH	METABOLOMICS NUTRIENTS/ SUBSTRATES ENDPRODUCTS INHIBITED BY Flaxseed [parent] Melatonin [parent] ENHANCED BY Partial Sleep Deprivation [parent] BIOTRANSFORMS BIOTRANFORM
ANTIBIOTIC RESISTANCE Tetracycline (tetm)	BIOFILM FORMERS	COGEM PATHOGENICITY Erysipelothrix tonsillarum (1) Erysipelothrix rhusiopathiae (2)

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